classicExpr-class           package:topGO           R Documentation

_C_l_a_s_s "_c_l_a_s_s_i_c_E_x_p_r" ~~~

_D_e_s_c_r_i_p_t_i_o_n:

     ~~ A concise (1-5 lines) description of what the class is.  ~~

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     Objects can be created by calls of the form 'new("classicExpr",
     testStatistic, name, groupMembers, exprDat, pType, ...)'. ~~
     describe objects here ~~

_S_l_o_t_s:


     '_e_D_a_t_a': Object of class '"environment"' ~~ 

     '_p_T_y_p_e': Object of class '"factor"' ~~ 

     '_n_a_m_e': Object of class '"character"' ~~ 

     '_a_l_l_M_e_m_b_e_r_s': Object of class '"character"' ~~ 

     '_m_e_m_b_e_r_s': Object of class '"character"' ~~ 

     '_t_e_s_t_S_t_a_t_i_s_t_i_c': Object of class '"function"' ~~ 

     '_t_e_s_t_S_t_a_t_P_a_r': Object of class '"list"' ~~ 

_E_x_t_e_n_d_s:

     Class '"groupStats"', directly.

_M_e_t_h_o_d_s:


     _a_l_l_M_e_m_b_e_r_s<- 'signature(object = "classicExpr")': ... 

     _e_m_p_t_y_E_x_p_r 'signature(object = "classicExpr")': ... 

     _g_e_t_S_i_g_G_r_o_u_p_s 'signature(object = "topGOdata", test.stat =
          "classicExpr")': ... 

     _G_O_g_l_o_b_a_l_T_e_s_t 'signature(object = "classicExpr")': ... 

     _i_n_i_t_i_a_l_i_z_e 'signature(.Object = "classicExpr")': ... 

     _m_e_m_b_e_r_s_E_x_p_r 'signature(object = "classicExpr")': ... 

     _p_T_y_p_e<- 'signature(object = "classicExpr")': ... 

     _p_T_y_p_e 'signature(object = "classicExpr")': ... 

_A_u_t_h_o_r(_s):

     Adrian Alexa

_S_e_e _A_l_s_o:

     'classicScore-class', 'groupStats-class', 'getSigGroups-methods'

_E_x_a_m_p_l_e_s:

     showClass("classicExpr")

