BSgenomeForge            package:BSgenome            R Documentation

_T_h_e _B_S_g_e_n_o_m_e_F_o_r_g_e _f_u_n_c_t_i_o_n_s

_D_e_s_c_r_i_p_t_i_o_n:

     The BSgenomeForge functions are intended to be used for making
     "Biostring-based genome data packages" (aka "BSgenome packages")
     like the BSgenome.Hsapiens.UCSC.hg18 package. They are not
     intended to be used by "regular" users of these packages.

     There are currently two BSgenomeForge functions: 'forgeSeqFiles'
     and 'forgeMaskFiles'.

_U_s_a_g_e:

       forgeSeqFiles(srcdir, destdir, names, prefix="", suffix="",
                     comments=NULL, single.seq=TRUE)
       forgeMaskFiles(srcdir, destdir, seqnames, seqdir,
                      masks_per_seq, agp_or_gap, prefix=NA, suffix=NA)

_A_r_g_u_m_e_n_t_s:

  srcdir: [TODO: Document me] 

 destdir: [TODO: Document me] 

   names: [TODO: Document me] 

  prefix: [TODO: Document me] 

  suffix: [TODO: Document me] 

comments: [TODO: Document me] 

single.seq: [TODO: Document me] 

seqnames: [TODO: Document me] 

  seqdir: [TODO: Document me] 

masks_per_seq: [TODO: Document me] 

agp_or_gap: [TODO: Document me] 

_A_u_t_h_o_r(_s):

     H. Pages

