useDynLib("simpleaffy")

## imports generated by codetoolsBioC v. 0.0.8 for simpleaffy v. 2.19.2

importClassesFrom(affy, AffyBatch)

importClassesFrom(Biobase, ExpressionSet)

importClassesFrom(methods, character, data.frame, matrix, missing,
                  numeric)

importFrom(methods, as, new)

importFrom(utils, write.table)

importFrom(grDevices, bitmap)

importFrom(graphics, layout, lines, par, plot, points, polygon, text)

importFrom(stats, as.dendrogram, as.dist, hclust, order.dendrogram, pt,
           t.test)

importFrom(BiocGenerics, image)

importFrom(Biobase, read.AnnotatedDataFrame)

importFrom(affy, affy.scalevalue.exprSet, cleancdfname, expresso,
           merge.AffyBatch, ReadAffy, rma)

importFrom(genefilter, fastT)

importFrom(gcrma, gcrma)

importMethodsFrom(affy, cdfName, image, indexProbes, intensity,
                  "intensity<-", mm, mmindex, pm, pmindex, probeNames)

importMethodsFrom(Biobase, annotation, experimentData,
                  "experimentData<-", exprs, "exprs<-", featureNames,
                  pData, "pData<-", phenoData, "phenoData<-", preproc,
                  "preproc<-", sampleNames, "varLabels<-")

## existing exports

exportPattern("^[^.]")

exportClasses("PairComp",
              "QCStats"
              )

exportMethods(
              "[",
              "avbg",
              "calculated.from",
              "calls",
              "fc",
              "get.array.subset",
              "group",
              "maxbg",
              "means",
              "members",
              "minbg",
              "pData",
              "percent.present",
              "plot",
              "qc",
              "qcProbes",
              "ratios",
              "sfs",
              "spikeInProbes",
              "target",
              "tt"
              )
