export(archive)
export(booleanFilter)
export(char2booleanFilter)
export(flowWorkspace.par.get)
export(flowWorkspace.par.set)
export(GatingSetList)
export(getChannelMarker)
export(getFJWSubsetIndices)
export(getIndiceMat)
export(getLoglevel)
export(isNcdf)
export(load_gs)
export(load_gslist)
export(mkformula)
export(save_gs)
export(save_gslist)
export(setLoglevel)
export(unarchive)
exportClasses(booleanFilter)
exportClasses(flowJoWorkspace)
exportClasses(GatingHierarchy)
exportClasses(GatingSet)
exportClasses(GatingSetList)
exportMethods("[")
exportMethods("[[")
exportMethods("flowData<-")
exportMethods("pData<-")
exportMethods(add)
exportMethods(clone)
exportMethods(closeWorkspace)
exportMethods(flowData)
exportMethods(GatingSet)
exportMethods(getChildren)
exportMethods(getCompensationMatrices)
exportMethods(getData)
exportMethods(getGate)
exportMethods(getIndices)
exportMethods(getKeywords)
exportMethods(getNodes)
exportMethods(getParent)
exportMethods(getPopStats)
exportMethods(getProp)
exportMethods(getSample)
exportMethods(getSampleGroups)
exportMethods(getSamples)
exportMethods(getSingleCellExpression)
exportMethods(getTotal)
exportMethods(getTransformations)
exportMethods(keyword)
exportMethods(lapply)
exportMethods(length)
exportMethods(openWorkspace)
exportMethods(parseWorkspace)
exportMethods(pData)
exportMethods(plot)
exportMethods(plotGate)
exportMethods(plotPopCV)
exportMethods(recompute)
exportMethods(sampleNames)
exportMethods(setGate)
exportMethods(setNode)
exportMethods(show)
exportMethods(summary)
import(data.table)
importClassesFrom(flowCore,concreteFilter)
importClassesFrom(flowCore,ellipsoidGate)
importClassesFrom(flowCore,expressionFilter)
importClassesFrom(flowCore,filter)
importClassesFrom(flowCore,filterList)
importClassesFrom(flowCore,filters)
importClassesFrom(flowCore,filtersList)
importClassesFrom(flowCore,flowFrame)
importClassesFrom(flowCore,flowSet)
importClassesFrom(flowCore,intersectFilter)
importClassesFrom(flowCore,polygonGate)
importClassesFrom(flowCore,rectangleGate)
importClassesFrom(graph,graphNEL)
importClassesFrom(methods,ANY)
importClassesFrom(methods,character)
importClassesFrom(methods,data.frame)
importClassesFrom(methods,environment)
importClassesFrom(methods,list)
importClassesFrom(methods,logical)
importClassesFrom(methods,matrix)
importClassesFrom(methods,missing)
importClassesFrom(methods,numeric)
importClassesFrom(methods,oldClass)
importClassesFrom(XML,XMLInternalDocument)
importFrom(Biobase,"pData<-")
importFrom(Biobase,description)
importFrom(Biobase,exprs)
importFrom(Biobase,pData)
importFrom(Biobase,sampleNames)
importFrom(BiocGenerics,duplicated)
importFrom(flowCore,add)
importFrom(flowCore,compensation)
importFrom(flowCore,filterList)
importFrom(flowCore,filters)
importFrom(flowCore,filtersList)
importFrom(flowCore,keyword)
importFrom(flowCore,polygonGate)
importFrom(flowCore,read.FCS)
importFrom(flowCore,read.FCSheader)
importFrom(flowCore,read.flowSet)
importFrom(flowCore,rectangleGate)
importFrom(flowCore,Rm)
importFrom(graph,addEdge)
importFrom(graph,graphNEL)
importFrom(gridExtra,grid.arrange)
importFrom(lattice,barchart)
importFrom(latticeExtra,ggplot2like)
importFrom(ncdfFlow,getIndices)
importFrom(plyr,.)
importFrom(plyr,ddply)
importFrom(Rcpp,evalCpp)
importFrom(Rgraphviz,agread)
importFrom(stats,na.omit)
importFrom(stats4,plot)
importFrom(tools,file_ext)
importFrom(utils,menu)
importFrom(XML,"xmlAttrs<-")
importFrom(XML,addChildren)
importFrom(XML,free)
importFrom(XML,saveXML)
importFrom(XML,xmlAttrs)
importFrom(XML,xmlCDataNode)
importFrom(XML,xmlGetAttr)
importFrom(XML,xmlNode)
importFrom(XML,xmlRoot)
importFrom(XML,xmlTreeParse)
importFrom(XML,xmlValue)
importFrom(XML,xpathApply)
importMethodsFrom(flowCore,"colnames<-")
importMethodsFrom(flowCore,"parameters<-")
importMethodsFrom(flowCore,colnames)
importMethodsFrom(flowCore,compensate)
importMethodsFrom(flowCore,identifier)
importMethodsFrom(flowCore,nrow)
importMethodsFrom(flowCore,parameters)
importMethodsFrom(flowCore,sampleNames)
importMethodsFrom(flowCore,spillover)
importMethodsFrom(flowCore,Subset)
importMethodsFrom(flowViz,densityplot)
importMethodsFrom(flowViz,xyplot)
importMethodsFrom(graph,"nodeData<-")
importMethodsFrom(graph,"nodeDataDefaults<-")
importMethodsFrom(graph,addEdge)
importMethodsFrom(graph,addNode)
importMethodsFrom(graph,nodeData)
importMethodsFrom(graph,removeNode)
importMethodsFrom(graph,subGraph)
importMethodsFrom(methods,coerce)
importMethodsFrom(methods,show)
importMethodsFrom(ncdfFlow,"pData<-")
importMethodsFrom(ncdfFlow,lapply)
importMethodsFrom(ncdfFlow,rbind2)
importMethodsFrom(Rgraphviz,AgEdge)
importMethodsFrom(Rgraphviz,AgNode)
importMethodsFrom(Rgraphviz,name)
importMethodsFrom(Rgraphviz,nodeData)
importMethodsFrom(Rgraphviz,nodeDataDefaults)
importMethodsFrom(Rgraphviz,renderGraph)
useDynLib(flowWorkspace)
