Package: chipenrich
Type: Package
Title: Gene set enrichment for ChIP-seq peak data
Version: 1.2.0
Date: 2013-08-31
Authors@R: c( person(c("Ryan","P."),"Welch",role =
        c("aut","cre","cph"),email = "welchr@umich.edu"),
        person("Chee","Lee",role = c("ctb"),email =
        "cheelee@umich.edu"), person(c("Laura","J."),"Scott",role =
        c("ths"), email = "ljst@umich.edu"),
        person(c("Maureen","A."),"Sartor",role = c("ths"),email =
        "sartorma@med.umich.edu"))
Description: ChIP-Enrich performs gene set enrichment testing using
        peaks called from a ChIP-seq experiment. The method empirically
        corrects for confounding factors such as the length of genes,
        and the mappability of the sequence surrounding genes.
License: GPL-3
Imports: chipenrich.data, methods, GenomicRanges (>= 1.10.0), IRanges
        (>= 1.16.0), mgcv, plyr (>= 1.7.0), lattice, latticeExtra,
        grid, stringr (>= 0.6), reshape
Depends: R (>= 2.15.1)
LazyLoad: yes
Author: Ryan P. Welch [aut, cre, cph], Chee Lee [ctb], Laura J. Scott
        [ths], Maureen A. Sartor [ths]
Maintainer: Ryan P. Welch <welchr@umich.edu>
biocViews: Software, GeneSetEnrichment
Packaged: 2014-04-12 10:31:37 UTC; biocbuild
Built: R 3.1.0; ; 2014-04-12 12:11:05 UTC; windows
