d7d169bce603136ba7fdd866f234da71 *DESCRIPTION
fa911263c44d1dd0e22f906f3c6e1357 *INDEX
f05ae24347b325dccec33aee19074d4c *Meta/Rd.rds
370e4c8f30ea3b343930b705c5b342d7 *Meta/hsearch.rds
22cf8dc371d93f8edff60fab8c043b50 *Meta/links.rds
e5fd2bdee0c9acf40751c5a31a676bb2 *Meta/nsInfo.rds
81054f558c17bb422913b0ba9538dc0f *Meta/package.rds
fd855a39f809e092df23d76c6b59f80e *Meta/vignette.rds
d862c85e71d87a5dea1523cf3ff01b05 *NAMESPACE
22ce48efb8a340cc33b3e8746530f3fa *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/VariantAnnotation
41da2300da49c68948827adcf514d729 *R/VariantAnnotation.rdb
efc540ea3f28a37d6637d04c5e25c3c4 *R/VariantAnnotation.rdx
06340c5742b1959527a7f303bc2e1586 *doc/VariantAnnotation.R
5e3ee0204b104921c43df3c36edaadd2 *doc/VariantAnnotation.Rnw
183e2140476a68b5afd4728d77cb12eb *doc/VariantAnnotation.pdf
c465e58e0ff84f6a2817c7669a95d69b *doc/filterVcf.R
03afeddc60c45b8fe3ca909e418bdfa6 *doc/filterVcf.Rnw
ebc770116427f08a35a2f147271034c2 *doc/filterVcf.pdf
8bcf104cc9a2b662d0a6f75fca98453e *doc/index.html
be4950fb484e1070402e189e254b1a92 *extdata/chr22.vcf.gz
c303d8a0cc7e6314b5f42348221b0d3b *extdata/chr22.vcf.gz.tbi
a4ca21413e322997ed17c5429e65b9ca *extdata/chr7-sub.vcf.gz
dc5c0ecc784ff39509a164f3020b72f8 *extdata/chr7-sub.vcf.gz.tbi
00213792673cddfaf7ac9606dc226f14 *extdata/ex2.vcf
277341ce20f406ab09a0c23c6bd0d86f *extdata/gl_chr1.vcf
f2a805083bd71e155f977ffb49df2cd5 *extdata/h1187-10k.vcf.gz
fab30e49f0d054d462f8e1737844b204 *extdata/h1187-10k.vcf.gz.tbi
48852d332eb21dd639b4c6be53762357 *extdata/structural.vcf
3737fa35d9911377d4cb300cfcb4b127 *help/AnIndex
e29f64db571c03b394422ef3296c1b36 *help/VariantAnnotation.rdb
0ff2947be82c5968524b8a2fd692d4c6 *help/VariantAnnotation.rdx
48079166999395469a46e417f095c6dd *help/aliases.rds
9b0d8d0df3d2b9ac9b3250bf086dad51 *help/paths.rds
d436b6b857d1f5e07d41cd038a29beb7 *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
d3a2ee9bd92219370bfc69dfe5d8ab25 *libs/i386/VariantAnnotation.dll
53c0166838c362f110be675388e7ed3a *libs/x64/VariantAnnotation.dll
b866ad3fe9b8ea6f25427633af0944f0 *scripts/test_Rplinkseq.R
b7a9592a5de31dd84a3f7e8d1e0332de *unitTests/cases/FORMAT_header_no_SAMPLEs.vcf
6e6064d7c429a35bc80235a253eed6f3 *unitTests/cases/VarScan_header.vcf
1e72c29c93e39910d59e569aad8db3db *unitTests/cases/expand.vcf
b94fb85e5ef300d87ab437d75f899b5a *unitTests/cases/fewer-FORMAT-than-GENO.vcf
3e81314c823a90ca24120330c546e7b0 *unitTests/cases/missing-FORMAT-metadata-elt.vcf
ba4c3b28d5f63740fda11e70a19eccd7 *unitTests/cases/mixedStructural.vcf
752d9d47c17d8f66791ce8804d88dbf6 *unitTests/cases/negative_FORMAT_Number.vcf
39d8ae8aa155e4bac07e9215017143e7 *unitTests/cases/no_FORMAT_column.vcf
4be0f539f13136116e1df4292adeb571 *unitTests/cases/no_GENO_row.vcf
a99d3b281abdd928c30fd147de3848a0 *unitTests/cases/no_INFO_header.vcf
0c5bd63cfafbad13a8591b4963e0d411 *unitTests/cases/unspecified_INFO_FORMAT_fields.vcf
3756faae9d9fbb654d7e48ae94a4d08a *unitTests/test_SIFTandPolyPhen.R
aa01c6d20520f4516cc76f11b1041b64 *unitTests/test_ScanVcfParam-class.R
6072dc6629bc3772cd77a901d473158b *unitTests/test_VCF-class.R
ae2c109f9ca56a950366b76ff59be841 *unitTests/test_VRanges-class.R
f4591255b3d620987342a4b17d09cc2a *unitTests/test_expand-methods.R
2fcea1933cb2a3e2328b75683fd265e2 *unitTests/test_filterVcf.R
d51b86a264c89d287ab21d6195e94215 *unitTests/test_genotypeToSnpMatrix.R
25139d8ce323074afd52e934a93a12a8 *unitTests/test_isSNV.R
26249fa5c8af8875b39ae8c5bd476675 *unitTests/test_locateVariants-methods.R
69a0f9520ea9fa8b95cce2a694c6647f *unitTests/test_predictCoding-methods.R
8d4d6b3c3460125772d3df70d194f363 *unitTests/test_readVcf-methods.R
c76b769a616956969112af0caa7bda2a *unitTests/test_scanVcf.R
e45debe5cc9e5a797032c5ece476a74c *unitTests/test_snpSummary.R
2c1e20a06ce85cb2c363d019d0e21b5f *unitTests/test_summarizeVariants-methods.R
c9f8fad4c1a446f84ab814377b00154f *unitTests/test_writeVcf-methods.R
