Package: RPA
Type: Package
Title: RPA: Robust Probabilistic Averaging for probe-level analysis
Version: 1.20.01
Date: 2014-08-13
Author: Leo Lahti <leo.lahti@iki.fi>
Maintainer: Leo Lahti <leo.lahti@iki.fi>
Depends: R (>= 2.15.0), affy, affydata, methods, parallel
biocViews: GeneExpression, Microarray, Preprocessing, QualityControl
Description: Probabilistic analysis of probe reliability and
    differential gene expression on short oligonucleotide
    arrays. Lahti et al. "Probabilistic Analysis of Probe
    Reliability in Differential Gene Expression Studies with
    Short Oligonucleotide Arrays", TCBB/IEEE, 2011.
    http://doi.ieeecomputersociety.org/10.1109/TCBB.2009.38
License: BSD_2_clause + file LICENSE
LazyLoad: yes
Collate: 'AllClasses.R' 'AllGenerics.R' 'd.update.fast.R'
        'estimate.affinities.R' 'firstlib.R' 'frpa.R'
        'initialize.priors.R' 'internals.R' 'online.quantile.R'
        'plot-methods.R' 'probe.analysis.R' 'rpa.R' 'rpa.fit.R'
        'rpa.online.R' 'rpa.plot.R' 'rpa.summarize.R' 'RPA.dcost.R'
        'RPA.iteration.R' 'RPA-package.R' 'RPA.preprocess.R'
        'RPA.tau2.update.R' 'show-methods.R' 'summarize.batches.R'
        'toydata.R' 'update.hyperparameters.R' 'get.probe.matrix.R'
        'summarize.batch.R' 'estimate.hyperparameters.R'
        'updating.hyperparameters.R'
Packaged: 2014-08-15 02:55:35 UTC; biocbuild
Built: R 3.1.1; ; 2014-08-15 11:53:10 UTC; windows
