9ece439584b96eaf9d6d8e98975d4be5 *CITATION
a767ec2269518db6620c5a7758479821 *DESCRIPTION
a199dac1dce0bb755cda0b939240204e *INDEX
2a1696b53b247b8ceb55b1da7d1bc1fa *Meta/Rd.rds
74d056f285a1933098e46e3da6097e9b *Meta/data.rds
67078d432f0ba1fba10dfcfb07ef7f34 *Meta/hsearch.rds
0ddd77624660980c0c318a6fb474e00a *Meta/links.rds
78f15830c473e89d0922f61eb8922546 *Meta/nsInfo.rds
aa552b645fde6275adfafaf2e29dd4f6 *Meta/package.rds
daeb303bcf0bedb49639bcf91923c30b *Meta/vignette.rds
b28bbb690e177bfaa1a54660be920c49 *NAMESPACE
4f84ca1a1d8d847d8a235e2e8092a7f4 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/GGtools
5e8d45505d5ad902b90d7a2f635dcd9d *R/GGtools.rdb
2e78dd75204e2566d92c13ea6c78babd *R/GGtools.rdx
2d857af3929ce9358785d6f1c88488b1 *cloud/ciseqByCluster.R
91b163162ea613f70bfb5361a4b128a6 *cloud/newtest.R
ce268907a4cf5fe84422a82786886028 *data/b1.rda
83b83d4cd955d83dad9f9166378d8ed5 *data/b2.rda
827cc98e63ea14abcde95d582fd0ef21 *data/datalist
14a7399b5c1a0034e919b9efbb3712c2 *data/eset.rda
8df9e3f30344660eb531b0694838ad47 *data/hg19.si.df.rda
8453f767219044e1f65cd3fda72ed2ba *data/hmm878.rda
4af585c6b43f363f5ded49c395ce768c *data/strMultPop.rda
023543bef36c7a53e8173f7eb4c09e9c *doc/GGtools.R
4b27be7b414928d1b1f7d2eefcbf31ad *doc/GGtools.Rnw
5e3ccbb4c90b389459942aa3d6b3464e *doc/GGtools.pdf
97ab1237f2d0629b39205f1c7bfa0df5 *doc/index.html
9d0889464adde84c3ebdedeb4e465934 *extpacksupp/DESCRIPTION.proto
01cf0ffee5df4ade897690a572a72cf1 *extpacksupp/zzz.R
080e248cf25bef2f85642cb3b2207c02 *hapmap/relationships_w_pops_051208.txt
f4a111bc825ffb5116de617b3ca5e4a4 *hapmap/smallc20CEU.txt.gz
c7572fb4098adfc24edbf6a8499feb78 *hapmap/src.rel.txt
5d67a139e708552988e0e8634900dd46 *help/AnIndex
3059fc8b593e421ac03e2d914504ce22 *help/GGtools.rdb
1c9a9117fa289e9cce9dcf17a32cb1a5 *help/GGtools.rdx
14de7e0dc920217a9314d3db99fa0884 *help/aliases.rds
3ad0acb25c728e9ed96c8de9e3f445c6 *help/paths.rds
356b1ea140b9f75f5774186faa09ffa9 *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
ba879be3ca3b879341b8d7a05484ed35 *oldRsrc/X2chunk.R
c68100c7e008fb043318fcdcfb0346f4 *oldRsrc/allS4.R
171c1f86fd2d650b222d481bb6785527 *oldRsrc/bestCis.R
4b5d4b5eabba2022b2219069e7a1b96e *oldRsrc/bindScores.R
0c4177444bd82095899966da16a7e496 *oldRsrc/cisFDR.R
1ad64de8c05430e1a45d1a4c7b93724a *oldRsrc/cisSnpTests.R
4408dcde0d2f9ce515751f471023f302 *oldRsrc/cisgetter.R
382a644ab9f56a89d19dff626cae062e *oldRsrc/clipPCs.R
0b9a7730d6e21841b39c343ee9338723 *oldRsrc/comb.R
2e4362523b4d63bd25c35d525fb7a564 *oldRsrc/egtset.R
d76492f7b489b9f237902c26cc95d1b7 *oldRsrc/eqtlEstimates.R
c63f6dea3aae15ecbd6c545714cc7e95 *oldRsrc/exome_minp.R
e576f66d11cc6c369d68e87cda090525 *oldRsrc/externalize.R
62a1ab3e34e524624fe01aecf1b26f15 *oldRsrc/feqtltests.R
c4bd4a07fe4f0edcb36311bd55ceafeb *oldRsrc/filterCode.R
14a81392ebc947269cb28845ddd0d034 *oldRsrc/fullsynth.R
c90f1216d9d90a63cbbf4217e9983bb5 *oldRsrc/geneRanges.R
7a824e134a7856d11a05cd079a09f0fb *oldRsrc/geneTrack.R
717f5b051d9a161b167d64c51a48285a *oldRsrc/getTransScores.R
01af0fb5255db132d4627b1f1e10d625 *oldRsrc/gwSnpScreen.R
4581c4047b3062ec946e27ab286ab502 *oldRsrc/interleave2cis.R
93ae4585f9a944cc5c5f8fe2455a311e *oldRsrc/machutils.R
e12fd55f975c109b791fba7a8e4e4aac *oldRsrc/minp.R
07c06e6d3ecfd36c88a984d057ed8049 *oldRsrc/multff.R
6bc2606ab798baa33c18538d1cd955ac *oldRsrc/newEQTL.R
77a26ccd4a218f5d6594e043c9ad769c *oldRsrc/pcc.R
799d71deab3cc37976eac39d95dcd670 *oldRsrc/permEx.R
f2aecef7881821a5e96a8bd40ca445a8 *oldRsrc/probeloc.R
d5442cf11c7df4e1e2cdbeea51344986 *oldRsrc/regressOut.R
6a1e8c05cdbdf77d07f5ac7d1d465081 *oldRsrc/scoresInRanges.R
42321c1abf4cf837011e276f342bdbae *oldRsrc/shiftRight.R
b255578567c6dde8b8d918259de3d011 *oldRsrc/snp130locs.R
50ed9c8b03d9bd522f7aabb3eef4c9c1 *oldRsrc/sumDirectors.R
8939f5ec4aa7d3d0d6c2e87eaaf33439 *oldRsrc/zzz.R
846fce21ccf9f84d683144c0d39a9b03 *oldman/GGtools-package.Rd
90f2cabc8a4e36ed8de558eee7f5f852 *oldman/X2chunk.Rd
17a3abf0ec21ddda0f5778bf0e710b98 *oldman/best.cis.eQTLs.Rd
e7b01a1258bf1874fe9a0a459108dfd1 *oldman/cisProxScores-class.Rd
2cca8b6e872dfe41efd4618038c61aee *oldman/cisProxScores.Rd
f878171d3e63ead14e1801ea24baabca *oldman/clipPCs.Rd
17fe8e5808cdbd567e43e308e330bbe2 *oldman/degnerASE01.Rd
772d427c7801f2df513f1b545c951b88 *oldman/dropMonomorphies.Rd
72ff010779f00e36bbe52fa244824944 *oldman/eqtlEstimatesManager-class.Rd
87156e9a35e929b97ee3e98949d8d1c4 *oldman/eqtlFDRtab-class.Rd
ee014537d752a2f2175f45bceab3aa4b *oldman/eqtlTests.Rd
f4a9429ba28ee02278cc873610f9c383 *oldman/eqtlTestsManager-class.Rd
5c9b87a4b46ebf3ec78f098c792eafbd *oldman/ex6.Rd
16577d53a16373942f151cdc0eac61f6 *oldman/exome_minp.Rd
d9f08f3b03d94d076782dbf994863634 *oldman/externalize.Rd
d96cbb99753a1fea678e9077ef617da1 *oldman/geneIndcol.Rd
6061cc126d1769e862e92ab139a34356 *oldman/geneRanges.Rd
713f78609b9af2e8d323b49e44a49c75 *oldman/genewiseFDRtab.Rd
388e3cca5d161703fdec4e2e16c792fa *oldman/gwSnpTests.Rd
354865553d12ae8234c10cfa9926208a *oldman/hla2set.Rd
89249ae90c0242e69e3610a9a2390ab5 *oldman/hmceuB36.2021.Rd
1a14573d19cca2e51fd0602c832daf6d *oldman/imphm2_1KG_20.Rd
b5e407d7d27d229c1ea443a37bf81341 *oldman/m20.Rd
982496115cc9ab7db27d6ae1106cfbb2 *oldman/makeCommonSNPs.Rd
10b5e2408662de79d7f3806bc8070433 *oldman/manhPlot.Rd
81679ec36d0092d43d15eff371f9eb37 *oldman/mkCisTransDirector.Rd
1d408e3d25d08841d188c7d5d4184344 *oldman/mrefhap2sm.Rd
f74b77f61b2841010eaf36d3f1366831 *oldman/multiCisDirector-class.Rd
9de3241fa70a66b3bccd58cb37394f58 *oldman/pcChooser.Rd
9f7b216db7f87f74979517ac66cdfbf3 *oldman/permEx.Rd
922a88acffbf8d6ec12ec59070526155 *oldman/plot-methods.Rd
f23716dd5934bd8977433ae530ed098f *oldman/probeLocations.Rd
286a94a73262368920dc7337b224f68c *oldman/relocate.Rd
8e7cb5fbb6cf3b57d77b094a47e420a4 *oldman/sm2ped.Rd
32713e2bbd0b0e9b75688edef640972f *oldman/topSnps-methods.Rd
57bd19af543e352d0372a2c0c0047775 *oldman/transManager-class.Rd
51a733c9fdc9d0f2dcfc4c8f9856ff21 *oldman/transScores.Rd
1cc9e8f867fbf57af906130651979170 *oldman/transTab.Rd
bde4e3c3d24314efced4978b9e6e4536 *oldman/vcf2sm-methods.Rd
50328cbdb5e18bb729bd92dd1382f149 *oldman/vcf2sm.Rd
9995ce0f0eca4451d17ec033333a7171 *parts/20.rda
e0a664878359499555e22851341d1af1 *parts/21.rda
e2e8ec8ddb8d2e659ab79a1a9f02b992 *provenance/human/doallgzOct17b.R
1c33587bf83092f86c0588042e56b95a *provenance/human/getall.sh
7d65db42eba5ef497a80902e6bb7bc54 *provenance/human/notes.txt
5f385573151ca5f22ae3a25a1801785d *provenance/mouse/notes.txt
5d549a89835345cf4045248492649963 *pup/combn238_chr6.pup
036b03dcbc6104d08483755c25fed6a8 *rdas/ceu_21.rda
2b75d28e353b6e6ef4752d36e293098a *rdas/ceu_22.rda
9ca360b12210bd36928f4e32519de172 *scripts/lkme.Rnw
fbc759e9e21e8f27e9fdd993b9d3c9ee *scripts/lkme.pdf
4c8d89f916b7947b389a5fd64f511474 *vcf/CEU.exon.2010_09.genotypes.vcf.gz
5b47cfadb916fcf9aa05ca18cb32e3cd *vcf/CEU.exon.2010_09.genotypes.vcf.gz.tbi
c05f30c7814f2e4d2e8d2d4d65f50dcf *vcf/provenance.txt
f1115a20e3a590ff340662ea2e6b2e3e *vcf/valid-4.0.vcf.gz
