Package: CNEr
Version: 1.0.0
Date: 2014-03-12
Title: CNE detection and visualization.
Description: Large-scale identification and advanced visualization of sets of conserved noncoding elements.
Author: Ge Tan <ge.tan09@imperial.ac.uk> 
Maintainer: Ge Tan <ge.tan09@imperial.ac.uk>
Imports: Biostrings(>= 2.26.3), RSQLite(>= 0.11.4), GenomicRanges(>=
        1.12.5), rtracklayer(>= 1.20.4), XVector(>= 0.2.0), DBI(>=
        0.2-7), GenomicAlignments(>= 0.99.17), methods, IRanges(>=
        1.19.38)
Depends: R (>= 3.0.2)
Suggests: Gviz(>= 1.7.4), RUnit, BiocGenerics
LinkingTo: IRanges, XVector
System Requirements: blat
License: GPL-2 | file LICENSE
License_restricts_use: yes
URL: http://ancora.genereg.net/
Type: Package
biocViews: GeneRegulation, Visualization, DataImport
NeedsCompilation: yes
LazyData: no
Collate: AllGenerics.R AllClasses.R utils.R ceScan.R plot.R
        makeGeneDbFromUCSC.R io.R scoringMatrix.R subAxt-methods.R
Packaged: 2014-04-12 10:41:08 UTC; biocbuild
Built: R 3.1.0; i386-w64-mingw32; 2014-04-12 12:30:19 UTC; windows
Archs: i386, x64
