ASEset-barplot          barplot ASEset objects
ASEset-class            ASEset objects
ASEset-locationplot     locationplot ASEset objects
AllelicImbalance-package
                        A package meant to provide all basic functions
                        for high-throughput allele specific expression
                        analysis
GRvariants              GRvariants object
binom.test,ASEset-method
                        binomial test
chisq.test,ASEset-method
                        chi-square test
getAlleleCounts         snp count data
getAlleleCounts2        snp count data
getAreaFromGeneNames    Get Gene Area
getDefaultMapBiasExpMean
                        Map Bias
getGenesFromAnnotation
                        AnnotationDb wrappers
getSnpIdFromLocation    Get rsIDs from locations of SNP
impBamGAL               Import Bam
impBcfGRL               Import Bcf Selection
initialize-ASEset       Initialize ASEset
reads                   reads object
scanForHeterozygotes    scanForHeterozygotes
