| a | RAW Microarray Data |
| getDifferentialExpressedGenes | Find Differentially Expressed Genes |
| MDSplot | Multidimensional Scaling Plots |
| myHeatmap | Plot Heatmaps |
| myHeatmap2 | Plot Heatmaps |
| pamCluster | Clustering of Most Variable Genes |
| plotProjection | Overview of the Sample Expression |
| x | Normalized Microarray Data |
| xq | qPCR Gene Expression |
| xql | Position-dependent Gene Expression |