Package: rnaSeqMap
Type: Package
Title: rnaSeq secondary analyses
Version: 2.18.0
Date: 2013-09-16
Author: Anna Lesniewska <alesniewska@cs.put.poznan.pl>; Michal Okoniewski <michal@fgcz.ethz.ch> 
Maintainer: Michal Okoniewski <michal@fgcz.ethz.ch>
Depends: R (>= 2.11.0), methods, Biobase, Rsamtools
Imports: GenomicRanges , IRanges, edgeR, DESeq, DBI
Description: The rnaSeqMap library provides classes and functions to analyze the RNA-sequencing data using the coverage profiles in multiple samples at a time
License: GPL-2
biocViews: Annotation, Bioinformatics, ReportWriting, Transcription,
        GeneExpression, DifferentialExpression,
        HighThroughputSequencing, RNAseq, SAGE, Visualization
Collate: zzz.R utils.R plots.R NucleotideDistr.R SeqReads.R NDplots.R
        NDtransforms.R bam2sig.R parseGff3.R pipelines.R
        normalizations.R measures.R generators.R camelWrapper.R
Packaged: 2013-10-15 07:34:28 UTC; biocbuild
Built: R 3.0.2; i386-w64-mingw32; 2013-10-15 15:59:32 UTC; windows
Archs: i386, x64
