openCyto-package	openCyto
.isPolyfunctional	isPolyfunctional
.prior_flowClust1d	prior_flowClust1d
.prior_kmeans	prior_kmeans
alias	names
alias,gtPopulation-method	names
boolMethod-class	boolMethod-class
cytokine	tailgate
dims	names
dims,gtMethod-method	names
fcFilter-class	fcFilter-class
fcFilterList	fcFilterList
fcFilterList-class	fcFilterList-class
fcPolygonGate	fcPolygonGate
fcPolygonGate-class	fcPolygonGate-class
fcRectangleGate	fcRectangleGate
fcRectangleGate-class	fcRectangleGate-class
fcTree	fcTree
fcTree-class	fcTree-class
flowClust.1d	flowClust1d
flowClust.2d	flowClust2d
gating	gating
gating,boolMethod,GatingSet-method	gating
gating,boolMethod,GatingSetList-method	gating
gating,gatingTemplate,GatingSet-method	gating
gating,gatingTemplate,GatingSetList-method	gating
gating,gtMethod,GatingSet-method	gating
gating,gtMethod,GatingSetList-method	gating
gating,polyFunctions,GatingSet-method	gating
gating,polyFunctions,GatingSetList-method	gating
gating,refGate,GatingSet-method	gating
gating,refGate,GatingSetList-method	gating
gatingTemplate	gatingTemplate-class
gatingTemplate,character-method	gatingTemplate-class
gatingTemplate-class	gatingTemplate-class
getChildren	getNodes
getChildren,gatingTemplate,character-method	getNodes
getGate	getNodes
getGate,fcTree,character-method	getNodes
getGate,gatingTemplate,character-method	getNodes
getNodes	getNodes
getNodes,fcTree-method	getNodes
getNodes,gatingTemplate-method	getNodes
getParent	getNodes
getParent,gatingTemplate,character-method	getNodes
groupBy	names
groupBy,gtMethod-method	names
gtMethod-class	gtMethod-class
gtPopulation-class	gtPopulation-class
gtSubsets-class	gtSubsets-class
isCollapse	names
isCollapse,gtMethod-method	names
listgtMethods	listgtMethods
mindensity	mindensity
names	names
names,gtMethod-method	names
names,gtPopulation-method	names
openCyto	openCyto
parameters	names
parameters,gtMethod-method	names
plot	plot
plot,fcFilterList,ANY-method	getNodes
plot,fcTree,character-method	getNodes
plot,filterList,ANY-method	getNodes
plot,gatingTemplate,ANY-method	getNodes
plot,gatingTemplate,character-method	getNodes
plot,gatingTemplate,missing-method	getNodes
plot,gatingTemplate-method	getNodes
polyFunctions-class	polyFunctions-class
posteriors	posteriors
posteriors,fcFilter,ANY-method	posteriors
posteriors,fcFilter,character-method	posteriors
ppMethod	getNodes
ppMethod,gatingTemplate,character-method	getNodes
ppMethod-class	ppMethod-class
preprocessing	preprocessing
preprocessing,ppMethod,GatingSet-method	preprocessing
priors	priors
priors,fcFilter,ANY-method	priors
priors,fcFilter,character-method	priors
prior_flowClust	prior_flowClust
refGate-class	refGate-class
registerPlugins	registerPlugins
show	gatingTemplate-class
show,boolMethod-method	gatingTemplate-class
show,fcFilter-method	gatingTemplate-class
show,gatingTemplate-method	gatingTemplate-class
show,gtMethod-method	gtMethod-class
tailgate	tailgate
templateGen	templateGen
