.isPolyfunctional       A function to tell wether a gating method is
                        'polyFunctions'
.prior_flowClust1d      Elicits data-driven priors from a flowSet
                        object for a specified channel
.prior_kmeans           Elicits data-driven priors from a flowSet
                        object for specified channels using the K-Means
                        clustering algorithm
boolMethod-class        A class to represent a boolean gating method.
fcFilter-class          a virtual class that represents the gating
                        result generated by flowClust gating function
fcFilterList            constuctor for 'fcFilterList'
fcFilterList-class      a class that extends 'filterList' class.
fcPolygonGate           constuctor for 'fcPolygonGate'
fcPolygonGate-class     a concrete class that reprents the polygonGate
                        generated by flowClust
fcRectangleGate         constuctor for 'fcRectangleGate'
fcRectangleGate-class   a concrete class that reprents the
                        rectangleGate generated by flowClust
fcTree                  constructor of 'fcTree'
fcTree-class            A class to represent a flowClust tree.
flowClust.1d            Applies flowClust to 1 feature to determine a
                        cutpoint between the minimum cluster and all
                        other clusters.
flowClust.2d            Automatic identification of a population of
                        interest via flowClust based on two markers
gating                  Applies gatingTemplate to one GatingSet.
gatingTemplate-class    a class storing the gating method and
                        population information in a graphNEL object
getNodes                get nodes from gatingTemplate object
gtMethod-class          A class to represent a gating method.
gtPopulation-class      A class to represent a cell population that
                        will be generated by a gating method.
gtSubsets-class         A class representing a group of cell
                        populations.
listgtMethods           Print a list of the registered gating methods
mindensity              Determines a cutpoint as the minimum point of a
                        kernel density estimate between two peaks
names                   get gating method name
openCyto                Hierarchical Gating Pipeline for flow cytometry
                        data
plot                    plot a 'fcFilterList'
polyFunctions-class     A class to represent a polyFunctions gating
                        method.
posteriors              get posteriors from a 'fcFilter' object
ppMethod-class          A class to represent a preprocessing method.
preprocessing           apply a ppMethod to the 'GatingSet'
prior_flowClust         Elicits data-driven priors from a flowSet
                        object for specified channels
priors                  get priors from a 'fcFilter' object
refGate-class           A class to represent a reference gating method.
registerPlugins         Register a gating or preprocessing function
                        with OpenCyto
tailgate                Gates the tail of a density using the
                        derivative of a kernel density estimate after
                        standardizing and collapsing flowFrames
templateGen             generate a partially complete csv template from
                        the existing gating hierarchy
