mzID-package	mzID-package
attrExtract	attrExtract
attrExtractNameValuePair	attrExtractNameValuePair
countChildren	countChildren
flatten	flatten-methods
flatten,mzID,ANY-method	flatten-methods
flatten,mzID-method	flatten-methods
flatten,mzIDpeptides,ANY-method	flatten-methods
flatten,mzIDpeptides-method	flatten-methods
flatten,mzIDpsm,ANY-method	flatten-methods
flatten,mzIDpsm-method	flatten-methods
getAdditionalPar	getAdditionalPar
getDatabaseFile	getDatabaseFile
getDatabaseFilter	getDatabaseFilter
getDatabaseTranslation	getDatabaseTranslation
getEnzymes	getEnzymes
getFragmentTolerance	getFragmentTolerance
getMassTable	getMassTable
getModifications	getModifications
getParentTolerance	getParentTolerance
getPath	getPath
getRawFile	getRawFile
getSearchType	getSearchType
getSoftware	getSoftware
getThreshold	getThreshold
getVersion	getVersion
length	length
length,mzID-method	length
length,mzIDdatabase-method	length
length,mzIDevidence-method	length
length,mzIDparameters-method	length
length,mzIDpeptides-method	length
length,mzIDpsm-method	length
mzID	mzID
mzID-class	mzID-class
mzIDdatabase	mzIDdatabase
mzIDdatabase-class	mzIDdatabase-class
mzIDevidence	mzIDevidence
mzIDevidence-class	mzIDevidence-class
mzIDparameters	mzIDparameters
mzIDparameters-class	mzIDdatabase-class
mzIDpeptides	mzIDpeptides
mzIDpeptides-class	mzIDpeptides-class
mzIDpsm	mzIDpsm
mzIDpsm-class	mzIDpsm-class
show	show
type.convert	type.convert
