Package: customProDB
Type: Package
Title: Generate customized protein database from NGS data, with a focus
        on RNA-Seq data, for proteomics search.
Version: 1.2.0
Date: 2013-09-25
Author: xiaojing wang
Maintainer: xiaojing wang <xiaojing.wang@vanderbilt.edu>
Description: Generate customized protein sequence database from RNA-Seq data 
 for proteomics search
License: Artistic-2.0
Depends: R (>= 3.0.1), IRanges, AnnotationDbi, biomaRt
Imports: Rsamtools (>= 1.10.2), Biostrings (>= 2.26.3), IRanges,
        GenomicRanges (>= 1.13.18), GenomicFeatures (>= 1.13.15),
        biomaRt (>= 2.17.1), stringr, RCurl, plyr, VariantAnnotation
        (>= 1.7.28), rtracklayer, RSQLite, AnnotationDbi
Suggests: BSgenome.Hsapiens.UCSC.hg19
LazyLoad: yes
Packaged: 2013-10-15 08:24:28 UTC; biocbuild
Built: R 3.0.2; ; 2013-10-15 15:05:23 UTC; windows
