d9518c50b26a1866498eb0a486e76098 *DESCRIPTION
e5f691d8d96257bc3e158560c1dc072c *INDEX
df0fd822f875d50ad15ba9755e6c1c3b *Meta/Rd.rds
cccca42d05192b71fde5d0a7ed99107e *Meta/data.rds
52b2cfdeb69fcc113d51217f98eba2d0 *Meta/hsearch.rds
74f714f81f680c63fc34ff7adc992e6a *Meta/links.rds
03e21d9f0f8c0d445758d2cc9268aabb *Meta/nsInfo.rds
1d4d21aa2132478af2137e1c07f381c8 *Meta/package.rds
2ce0f5566a4bbca02318d422bd908c49 *Meta/vignette.rds
54a6a6f96a55ef144954f576ce91d497 *NAMESPACE
9cf2f7b64ecb29e42017b531244dd2d8 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/cummeRbund
54fb5f9b17c6af789af2983b6873b957 *R/cummeRbund.rdb
fb18d2c32da62bae2b59d74ad9794d80 *R/cummeRbund.rdx
95effbbbf6135a883a9cd3fbe1620eb5 *data/sampleData.RData
47cd8deb604624196a30cf60abf12bc5 *doc/ENCODE_SCV.pdf
ebcb935dba061978418ebae0aa4a7392 *doc/cuffData_schema.pdf
5d7f299ca2333d20f04c71e008db73bd *doc/cummeRbund-example-workflow.R
1cf17ce4c24507288a5272fd72003c6b *doc/cummeRbund-example-workflow.Rnw
ce19a76a3f7d71f3c880a717db07023b *doc/cummeRbund-example-workflow.pdf
7a75b2673707efba1aea7c6861dffa5a *doc/cummeRbund-manual.R
54008e426a878ee65e117fc856f23e15 *doc/cummeRbund-manual.Rnw
f45c903ed8ae8185c0491be6903fe4c5 *doc/cummeRbund-manual.pdf
963e026b0d4ef474a3acd5d4b3f79c18 *doc/index.html
d750866aa0c9df7b8a2416b605aad636 *extdata/cds.count_tracking
55054b333f3d37b29ec9c8d4ed247a5c *extdata/cds.diff
872cf05900e727e0d71b270d0ff53bea *extdata/cds.fpkm_tracking
bf863abcbbb9eab2b6dc4742ecfa010c *extdata/cds.read_group_tracking
7ea0edf89f0ddc5e834cb5466288d4b1 *extdata/cds_exp.diff
268c5340a737a3c211bcacc1a1c13693 *extdata/chr1_snippet.gtf
b926443705216b33fe2965e730efb46a *extdata/cuffData_schema.sql
8a5e8a2753eba7b6667dbe215a248fee *extdata/gene_exp.diff
af41baca8b3e26509452c2436d234d65 *extdata/genes.count_tracking
145fd3994f9648d5ada1d604e24c365c *extdata/genes.fpkm_tracking
c563202c95aa9aeaa08e4bf759a77df5 *extdata/genes.read_group_tracking
6157f98d3b7081152fcad9898a970a74 *extdata/isoform_exp.diff
d26a4ce41f3537165f5ec8720005fb5e *extdata/isoforms.count_tracking
3df37bd586fc05d216f551cdb8a25ff8 *extdata/isoforms.fpkm_tracking
732428dd0ee431d16139debde986a780 *extdata/isoforms.read_group_tracking
05a7e6754b834b16efeab5f32b761338 *extdata/promoters.diff
5504299772cc9202185abcb03fa8c31c *extdata/read_groups.info
4302c47866e67a5ccb87015bb4cfad4b *extdata/run.info
76743810e9158eadc8454d59bd2fb5e1 *extdata/splicing.diff
2ad3e5a485eba94a838bac21160715f5 *extdata/tss_group_exp.diff
d52d7fac3419d9e4158faa8972302c2f *extdata/tss_groups.count_tracking
5f6fcb9d599665971639f3b53dc40a54 *extdata/tss_groups.fpkm_tracking
dd6e1ea022372357ee00868068b80586 *extdata/tss_groups.read_group_tracking
2c2ef2a1901b6b96cd40025686951adb *help/AnIndex
91c4c2ea341c246a7e2ce71e8560f2f9 *help/aliases.rds
7d99e503c141e9d748c2cd0502af1f68 *help/cummeRbund.rdb
a246e4d9a73bb8b266c71b68a376f0fd *help/cummeRbund.rdx
f3b0c4a4da5845bcbff8a915a437a33a *help/paths.rds
2b7947779ac6760816403aaa3f21416f *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
c418b300973b33a65f28926ad1846a8f *reports/runReport.Rmd
108ea596a90bb417881a41977c59e3ab *reports/runReport.Rnw
