a4palette	a4palette
addQuantilesColors	addQuantilesColors
boxPlot	boxPlot
combineTwoExpressionSet	combineTwoExpressionSet
computeLogRatio	computeLogRatio
createExpressionSet	createExpressionSet
ExpressionSetWithComputation-class	ExpressionSetWithComputation
filterVarInt	filterVarInt
heatmap.expressionSet	heatmap.expressionSet
histPvalue	histPvalue
histPvalue,limma-method	histPvalue
histPvalue,MArrayLM-method	histPvalue
histPvalue,numeric-method	histPvalue
histPvalue,tTest-method	histPvalue
histpvalueplotter	histpvalueplotter
lassoReg	lassoReg
limmaTwoLevels	limmaTwoLevels
logReg	logReg
nlcvTT	nlcvTT
plot1gene	plot1gene
plotComb2Samples	plotComb2Samples
plotCombination2genes	plotCombination2genes
plotCombMultSamples	plotCombMultSamples
plotLogRatio	plotLogRatio
probabilitiesPlot	probabilitiesPlot
probe2gene	probe2gene
profilesPlot	profilesPlot
propDEgenes	propDEgenes
propDEgenes,limma-method	propDEgenes-methods
propDEgenes,numeric-method	propDEgenes-methods
propDEgenes-methods	propDEgenes-methods
propdegenescalculation	propdegenescalculation
replicates	replicates
spectralMap	spectralMap
spectralMap,ExpressionSet,character-method	spectralMap-methods
spectralMap-methods	spectralMap-methods
topTable,fTest-method	topTable-methods
topTable,glmnet-method	topTable-methods
topTable,limma-method	topTable-methods
topTable,MArrayLM-method	topTable-methods
topTable,pamClass-method	topTable-methods
topTable,rfClass-method	topTable-methods
topTable,tTest-method	topTable-methods
topTable-methods	topTable-methods
tTest	tTest
volcanoPlot	volcanoPlot
volcanoPlot,limma,missing,character-method	volcanoPlot-methods
volcanoPlot,limma,missing,missing-method	volcanoPlot-methods
volcanoPlot,numeric,numeric,character-method	volcanoPlot-methods
volcanoPlot,numeric,numeric,missing-method	volcanoPlot-methods
volcanoPlot,tTest,missing,character-method	volcanoPlot-methods
volcanoPlot,tTest,missing,missing-method	volcanoPlot-methods
volcanoPlot-methods	volcanoPlot-methods
volcanoplotter	volcanoplotter
