import(methods, BiocGenerics, IRanges, Rsamtools, hwriter)

importFrom(Biobase, addVigs2WinMenu, copySubstitute)
#importFrom(hwriter, hwrite, hwriteImage)

export(chrom.barplot,
	coverage.correlation,
	coverage.density, 
	coverage.hist,
	coverage.GC, 
	coverage.plot, 
	coverage.target, 
	coverage.targetlength.plot, 
	coverage.uniformity, 
	covered.k, 
	duplicates.barplot, 
	fraction.reads.target, 
	fraction.target, 
	get.baits,
	get.reads, 
	get.targets, 
	insert.size.hist,
	make.wigfiles,
	multiTEQCreport, 
	reads2pairs,
	readsPerTarget,
	TEQCreport)