5efae5b2bb32a0bde5c570bf7aae7733 *DESCRIPTION
27b80f7f7185212dc706b536da0f13b5 *INDEX
ac0c04ed44001aec32936b16a29c24b9 *Meta/Rd.rds
c2ecb6dcc349fde128a3ab46752891e4 *Meta/hsearch.rds
c2163788cb64386e1f5c16a5771dea37 *Meta/links.rds
dffeed78062b3b965d1f08525032f896 *Meta/nsInfo.rds
2cd73b445f5653eeeaa3be46acfc7106 *Meta/package.rds
c54b86bc0d0098ff57ea2039fc05fd16 *Meta/vignette.rds
da8b3c5cc2ec1861eb093a9c038eac05 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/SplicingGraphs
b4bef127a3b03e6f3c1399fbda24d4e9 *R/SplicingGraphs.rdb
898f75fd138e3391bbc6e398fbcdb482 *R/SplicingGraphs.rdx
55a0a1d435d97597b301555dd7186f5a *doc/SplicingGraphs.R
cc1b540f916437d159f9c74d06fcf010 *doc/SplicingGraphs.Rnw
533e186085abaf1b866c609ffa0cc7e3 *doc/SplicingGraphs.pdf
f9686137b1100809bacc11fa208b5f52 *doc/index.html
972706e5692c1cf7eb7c03071c8fabe7 *doc/precomputed_results/sg_with_bubbles.rda
6d5a0d85b65e18cd81ec5927a64a25a4 *doc/precomputed_results/sg_with_reads.rda
e927d6e86c26ef2f567f538e4d02c6bb *extdata/ASpatterns.txt
b10a130d5d8e8aa34a67c0676e678e42 *extdata/TSPCsg.rda
2496dff4893d460511d871a0c485aa6b *extdata/toy_genes.gff3
648ca39416010bda3340da48c26912ef *extdata/toy_overlaps.txt
d3b7b2533bb4e97a3f1be7bf70f4b588 *extdata/toy_reads.sam
71e55070b97080a32a5bd560da4b1a6d *help/AnIndex
f6d1d5b6b9b5387dcd4a57549dd29074 *help/SplicingGraphs.rdb
ce236cbe019932ba74746bd649dc08ae *help/SplicingGraphs.rdx
000e3b7ff5405c09dbd7af4d67813dd8 *help/aliases.rds
66ca8e0b01fc78f8045f3b58b4b2adfc *help/paths.rds
488878b152e5871952e4e53a496e9d89 *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
a4ffb1d79ec1ad7a54391b33a747b46f *scripts/TSPC-utils.R
cd9e0cede53ba0986867c34753b5ea5d *scripts/create-vignette-plots.R
44830c9a0141fe8277304d7419d7a20d *scripts/makeTSPCsg.R
ea1a52a5c851490f42819ede8acdc2eb *unitTests/test_countReads-methods.R
