Package: ReactomePA
Type: Package
Title: Reactome Pathway Analysis
Version: 1.6.1
Author: Guangchuang Yu <guangchuangyu@gmail.com>
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Description: This package provides functions for pathway analysis based on
    REACTOME pathway database. It will implement enrichment analysis, gene set
    enrichment analysis and functional modules detection.
Dependes: R (>= 2.10)
Imports: methods, AnnotationDbi, reactome.db, org.Hs.eg.db, DOSE,
        stats4, plyr, igraph, qvalue, graphics, graphite
Suggests: clusterProfiler, GOSemSim, knitr
VignetteBuilder: knitr
License: GPL-2
biocViews: Bioinformatics, Pathways, Visualization, Annotation
Collate: 'enrichPathway.R' 'zzz.R' 'ReactomePA-package.R'
        'viewPathway.R' 'gseAnalyzer.R'
Packaged: 2013-12-10 09:09:55 UTC; biocbuild
Built: R 3.0.2; ; 2013-12-10 16:51:14 UTC; windows
