Package: PathNet
Type: Package
Title: An R package for pathway analysis using topological information
Version: 1.2.0
Author: Bhaskar Dutta <bhaskar.dutta@gmail.com>, Anders Wallqvist <awallqvist@bhsai.org>, and Jaques Reifman <jreifman@bhsai.org>
Maintainer: Jason B. Smith <jsmith@bhsai.org>
Depends: R (>= 1.14.0)
Description: PathNet uses topological information present in pathways and 
 differential expression levels of genes (obtained from microarray experiment) 
 to identify pathways that are 1) significantly enriched and 2) associated 
 with each other in the context of differential expression. The algorithm is 
 described in: PathNet: A tool for pathway analysis using topological 
 information. Dutta B, Wallqvist A, and Reifman J. Source Code for
 Biology and Medicine 2012 Sep 24;7(1):10.
License: GPL-3
Suggests: PathNetData, RUnit, BiocGenerics
biocViews: Pathways, DifferentialExpression, MultipleComparisons
Packaged: 2013-10-15 08:13:42 UTC; biocbuild
Built: R 3.0.2; ; 2013-10-15 15:42:10 UTC; windows
