Package: LPE
Version: 1.36.0
Title: Methods for analyzing microarray data using Local Pooled Error
        (LPE) method
Author: Nitin Jain <emailnitinjain@gmail.com>,
        Michael O'Connell <michaelo@warath.com>,
        Jae K. Lee <jaeklee@virginia.edu>.
        Includes R source code contributed by HyungJun Cho <hcho@virginia.edu>
Maintainer: Nitin Jain <emailnitinjain@gmail.com>
Description: This LPE library is used to do significance analysis of microarray
    data with small number of replicates. It uses resampling based FDR
    adjustment, and gives less conservative results than traditional 'BH'
    or 'BY' procedures. Data accepted is raw data in txt format from MAS4,
    MAS5 or dChip. Data can also be supplied after normalization. 
    LPE library is primarily used for analyzing data between two conditions.
    To use it for paired data, see LPEP library. For using LPE in multiple
    conditions, use HEM library.
Imports: stats
License: LGPL
URL: http://www.r-project.org,
        http://www.healthsystem.virginia.edu/internet/hes/biostat/bioinformatics/,
        http://sourceforge.net/projects/r-lpe/
biocViews: Microarray, Bioinformatics, DifferentialExpression
Depends: R (>= 2.10)
Packaged: 2013-10-15 06:50:49 UTC; biocbuild
Built: R 3.0.2; ; 2013-10-15 15:32:21 UTC; windows
