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| FGNet-package | Functional gene networks derived from biological enrichment analyses |
| adjMatrix | Transforms into group-genes incidence matrices. |
| FGNet | Functional gene networks derived from biological enrichment analyses |
| functionalNetwork | Create and plot the functional gene network. |
| getResults_david | Get results from an analysis with David. |
| getResults_gtLinker | Get results from GeneTerm Linker. |
| getTerms | Get terms in the metagroups/clusters. |
| intersectionNetwork | Metagroup/Cluster intersection network. |
| plotMetagroupsDistance | Plots distances between metagroups. |
| query_david | Query DAVID. |
| query_gtLinker | Query GeneTerm Linker |
| report_david | Generate the Functional Network report for a gene list performing the functional analysis through GeneTerm Linker or DAVID. |
| report_gtLinker | Generate the Functional Network report for a gene list performing the functional analysis through GeneTerm Linker or DAVID. |
| toMatrix | Transforms into group-genes incidence matrices. |