DSS-package             Dispersion shrinkage for sequencing data
SeqCountSet-class       Class '"SeqCountSet"' - container for count
                        data from sequencing experiment
callDML                 Function to detect differntially methylated
                        loci (DML) for two group comparisons of
                        bisulfite sequencing (BS-seq) data.
dispersion              Acessor functions for the 'dispersion' slot in
                        a SeqCountData object.
estDispersion           Estimate and shrink tag-specific dipsersions
estNormFactors          Estimate normalization factors
makeBSseqData           Create an object of BSseq class from several
                        data frames.
normalizationFactor     Accessor functions for the
                        'normalizationFactor' slot in a SeqCountData
                        object.
seqData                 A simulated 'SeqCountData' object.
waldTest                Perform gene-wise Wald test for two group
                        comparisons for sequencing count data.
