biomvRCNS-class         Class '"biomvRCNS"'
biomvRGviz              Plot segmentation result using Gviz
biomvRhsmm              Estimating the most likely state sequence using
                        Hidden Semi Markov Model
biomvRmgmr              Batch process multiple sequences and samples
                        using max-gap-min-run algorithm for 2 states
                        segmentation
biomvRseg               Homogeneous segmentation of multi-sample
                        genomic data
coriell                 Array CGH data set of Coriell cell lines
encodeTP53              mapped RNA-seq data from ENCODE
hsmmRun                 Estimating the most likely state sequence using
                        Hidden Semi Markov Model
maxGapminRun            Max-gap-min-run algorithm for 2 states
                        segmentation
regionSegAlphaNB        Estimate matrix of dispersion parameter alpha
                        (size) used in 'regionSegCost' for negative
                        binomial distributed 'x'.
regionSegCost           Regional segmentation cost matrix
simSegData              Simulate exemplary segmentation data.
sojournAnno             Estimate sojourn distribution parameters from
                        posterior information like annotation data
splitFarNeighbour       Split segments if long gaps exist between
                        feature positions
variosm                 Differential methylation data from sequencing
