ALLs.chr22              Chromosome 22 subset of ALL data for ALL1/AF4
                        and E2A/PBX1
ChrMapPlot              Class containing a mapping between plot
                        location and probe or gene identifier.
ChrStrandData           Class to contain data associated with
                        chromosome coordinates across a whole genome.
ChrStrandMatrix         Class to contain data associated with genome
                        locations for a specific chromosome.
chrHeatMap              Plot ChrStrandMatrix objects as heat maps along
                        a chromosome
chrNames                Retrieve chromosome names from an object.
chrdata                 The ALLs.chr22 ExpressionSet, reformatted as a
                        ChrStrandData object
createChrMatrix         Generate chromosome-based subset matrices from
                        the mapped data structures generated by
                        makeChrStrandData
cytobands               Cytoband location information
drawMapDendro           Draw a heatmap and dendrogram for a
                        strand-specific data matrix generated by
                        createChrMatrix
grabChrMapProbes        Identify the probes or genes plotted using
                        plotChrMap
makeChrStrandData       Map a data matrix onto chromosome coordinates
makeChrStrandData-methods
                        Map a data matrix onto chromosome coordinates
makeRangedDataList      Plot expression data as tracks in the UCSC
                        genome browser
plotChrMap              Plot data as an annotated heat map along a
                        chromosome
stains                  Cytoband display information
strandName              Retrieve strand information from a
                        ChrStrandMatrix object.
