+,ggbio,ANY-method	ggbio-class
+,ideogram,ANY-method	plotSingleChrom
align.plots	tracks
alignPlots	tracks
Arith	tracks
Arith,Tracks,ANY-method	tracks
arrangeGrobByParsingLegend	arrangeGrobByParsingLegend
autoplot	autoplot-method
autoplot,BamFile-method	autoplot-method
autoplot,BSgenome-method	autoplot-method
autoplot,character-method	autoplot-method
autoplot,ExpressionSet-method	autoplot-method
autoplot,GappedAlignments-method	autoplot-method
autoplot,GRanges-method	autoplot-method
autoplot,GRangesList-method	autoplot-method
autoplot,IRanges-method	autoplot-method
autoplot,matrix-method	autoplot-method
autoplot,Rle-method	autoplot-method
autoplot,RleList-method	autoplot-method
autoplot,Seqinfo-method	autoplot-method
autoplot,SummarizedExperiment-method	autoplot-method
autoplot,TranscriptDb-method	autoplot-method
autoplot,VCF-method	autoplot-method
autoplot,Views-method	autoplot-method
backup	tracks
backup,Tracks-method	tracks
bgColor	tracks
bgColor,gg-method	tracks
bgColor,gtable-method	tracks
bgColor,ideogram-method	tracks
bgColor<-	tracks
bgColor<-,gg,character-method	tracks
bgColor<-,gtable,character-method	tracks
bgColor<-,ideogram,character-method	tracks
coord_genome	coord
fixed	tracks
fixed,gg-method	tracks
fixed,gtable-method	tracks
fixed,ideogram-method	tracks
fixed<-	tracks
fixed<-,gg,logical-method	tracks
fixed<-,gtable,logical-method	tracks
fixed<-,ideogram,logical-method	tracks
geom_alignment	geom_alignment-method
geom_alignment,GRanges-method	geom_alignment-method
geom_alignment,missing-method	geom_alignment-method
geom_alignment,TranscriptDb-method	geom_alignment-method
geom_alignment,uneval-method	geom_alignment-method
geom_arch	geom_arch-method
geom_arch,data.frame-method	geom_arch-method
geom_arch,GRanges-method	geom_arch-method
geom_arch,missing-method	geom_arch-method
geom_arch,uneval-method	geom_arch-method
geom_arrow	geom_arrow-method
geom_arrow,GRanges-method	geom_arrow-method
geom_arrow,missing-method	geom_arrow-method
geom_arrow,uneval-method	geom_arrow-method
geom_arrowrect	geom_arrowrect-method
geom_arrowrect,GRanges-method	geom_arrowrect-method
geom_arrowrect,missing-method	geom_arrowrect-method
geom_arrowrect,uneval-method	geom_arrowrect-method
geom_bar	geom_bar-method
geom_bar,chevron-method	geom_bar-method
geom_bar,data.frame-method	geom_bar-method
geom_bar,GRanges-method	geom_bar-method
geom_bar,missing-method	geom_bar-method
geom_chevron	geom_chevron-method
geom_chevron,GRanges-method	geom_chevron-method
geom_chevron,missing-method	geom_chevron-method
geom_chevron,uneval-method	geom_chevron-method
geom_rect	geom_rect-method
geom_rect,data.frame-method	geom_rect-method
geom_rect,GRanges-method	geom_rect-method
geom_rect,missing-method	geom_rect-method
geom_rect,uneval-method	geom_rect-method
geom_segment	geom_segment-method
geom_segment,data.frame-method	geom_segment-method
geom_segment,GRanges-method	geom_segment-method
geom_segment,missing-method	geom_segment-method
geom_segment,uneval-method	geom_segment-method
ggbio	ggbio-class
ggbio-class	ggbio-class
ggplot	ggplot-method
ggplot,BamFile-method	ggplot-method
ggplot,BSgenome-method	ggplot-method
ggplot,character-method	ggplot-method
ggplot,ExpressionSet-method	ggplot-method
ggplot,GappedAlignments-method	ggplot-method
ggplot,GRanges-method	ggplot-method
ggplot,GRangesList-method	ggplot-method
ggplot,IRanges-method	ggplot-method
ggplot,matrix-method	ggplot-method
ggplot,Rle-method	ggplot-method
ggplot,RleList-method	ggplot-method
ggplot,Seqinfo-method	ggplot-method
ggplot,SummarizedExperiment-method	ggplot-method
ggplot,TranscriptDb-method	ggplot-method
ggplot,VCF-method	ggplot-method
ggplot,Views-method	ggplot-method
hasAxis	tracks
hasAxis,gg-method	tracks
hasAxis,gtable-method	tracks
hasAxis,ideogram-method	tracks
hasAxis<-	tracks
hasAxis<-,gg,logical-method	tracks
hasAxis<-,gtable,logical-method	tracks
hasAxis<-,ideogram,logical-method	tracks
height	tracks
height,gg-method	tracks
height,gtable-method	tracks
height,ideogram-method	tracks
height<-	tracks
height<-,gg,numericORunit-method	tracks
height<-,gtable,numericORunit-method	tracks
height<-,ideogram,numericORunit-method	tracks
ideogram-class	plotSingleChrom
labeled	tracks
labeled,gg-method	tracks
labeled,gtable-method	tracks
labeled,gTree-method	tracks
labeled,ideogram-method	tracks
labeled,text-method	tracks
labeled<-	tracks
labeled<-,gg,logical-method	tracks
labeled<-,gtable,logical-method	tracks
labeled<-,ideogram,logical-method	tracks
layout_circle	layout_circle-method
layout_circle,GRanges-method	layout_circle-method
layout_circle,missing-method	layout_circle-method
layout_circle,uneval-method	layout_circle-method
layout_karyogram	layout_karyogram-method
layout_karyogram,GRanges-method	layout_karyogram-method
mold	mold-method
mold,eSet-method	mold-method
mold,ExpressionSet-method	mold-method
mold,GRanges-method	mold-method
mold,GRangesList-method	mold-method
mold,IRanges-method	mold-method
mold,matrix-method	mold-method
mold,Rle-method	mold-method
mold,RleList-method	mold-method
mold,Seqinfo-method	mold-method
mold,SummarizedExperiment-method	mold-method
mold,Views-method	mold-method
mutable	tracks
mutable,gg-method	tracks
mutable,gtable-method	tracks
mutable,ideogram-method	tracks
mutable<-	tracks
mutable<-,gg,logical-method	tracks
mutable<-,gtable,logical-method	tracks
mutable<-,ideogram,logical-method	tracks
plotFragLength	plotFragLength
plotFragLength,character,GRanges-method	plotFragLength
plotGrandLinear	plotGrandLinear
plotIdeogram	plotSingleChrom
plotKaryogram	plotStackedOverview
plotRangesLinkedToData	plotRangesLinkedToData
plotSingleChrom	plotSingleChrom
plotSpliceSum	plotSpliceSum
plotSpliceSum,character,GRangesList-method	plotSpliceSum
plotSpliceSum,character,TranscriptDb-method	plotSpliceSum
plotStackedOverview	plotStackedOverview
print	tracks
print,Tracks-method	tracks
rescale	rescale-method
rescale,gg-method	rescale-method
rescale,ggplot-method	rescale-method
rescale,numeric-method	rescale-method
reset	tracks
reset,Tracks-method	tracks
scale_fill_fold_change	scale_fill_fold_change
scale_fill_giemsa	scale_fill_giemsa
scale_x_sequnit	scale_x_sequnit
show	tracks
show,Tracks-method	tracks
stat_aggregate	stat_aggregate-method
stat_aggregate,GRanges-method	stat_aggregate-method
stat_aggregate,missing-method	stat_aggregate-method
stat_aggregate,uneval-method	stat_aggregate-method
stat_bin	stat_bin-method
stat_bin,data.frame-method	stat_bin-method
stat_bin,missing-method	stat_bin-method
stat_bin,Rle-method	stat_bin-method
stat_bin,RleList-method	stat_bin-method
stat_bin,uneval-method	stat_bin-method
stat_coverage	stat_coverage-method
stat_coverage,BamFile-method	stat_coverage-method
stat_coverage,GRanges-method	stat_coverage-method
stat_coverage,GRangesList-method	stat_coverage-method
stat_coverage,missing-method	stat_coverage-method
stat_coverage,uneval-method	stat_coverage-method
stat_gene	stat_gene-method
stat_gene,TranscriptDb-method	stat_gene-method
stat_identity	stat_identity-method
stat_identity,data.frame-method	stat_identity-method
stat_identity,GRanges-method	stat_identity-method
stat_identity,missing-method	stat_identity-method
stat_identity,Rle-method	stat_identity-method
stat_identity,RleList-method	stat_identity-method
stat_identity,uneval-method	stat_identity-method
stat_mismatch	stat_mismatch-method
stat_mismatch,BamFile-method	stat_mismatch-method
stat_mismatch,GRanges-method	stat_mismatch-method
stat_mismatch,missing-method	stat_mismatch-method
stat_mismatch,uneval-method	stat_mismatch-method
stat_reduce	stat_reduce-method
stat_reduce,GRanges-method	stat_reduce-method
stat_reduce,IRanges-method	stat_reduce-method
stat_reduce,missing-method	stat_reduce-method
stat_reduce,TranscriptDb-method	stat_reduce-method
stat_reduce,uneval-method	stat_reduce-method
stat_slice	stat_slice-method
stat_slice,missing-method	stat_slice-method
stat_slice,Rle-method	stat_slice-method
stat_slice,RleList-method	stat_slice-method
stat_slice,uneval-method	stat_slice-method
stat_stepping	stat_stepping-method
stat_stepping,GRanges-method	stat_stepping-method
stat_stepping,missing-method	stat_stepping-method
stat_stepping,uneval-method	stat_stepping-method
stat_table	stat_table-method
stat_table,GRanges-method	stat_table-method
stat_table,GRangesList-method	stat_table-method
stat_table,missing-method	stat_table-method
stat_table,uneval-method	stat_table-method
summary	tracks
summary,Tracks-method	tracks
theme_alignment	theme
theme_clear	theme
theme_noexpand	theme
theme_null	theme
theme_pack_panels	theme
theme_tracks_sunset	theme
tracks	tracks
Tracks-class	tracks
update	tracks
update,Tracks-method	tracks
xlim	tracks
xlim,GRanges-method	tracks
xlim,IRanges-method	tracks
xlim,numeric-method	tracks
xlim,Tracks-method	tracks
xlim<-	tracks
xlim<-,Tracks,GRanges-method	tracks
xlim<-,Tracks,IRanges-method	tracks
xlim<-,Tracks,numeric-method	tracks
