addImageTracks	HiTC-internal
binningC	binningC
CQC	CQC
detail	HTCexp-class
detail,HTCexp-method	HTCexp-class
detail-methods	HTCexp-class
discretize	discretize
divide	HTCexp-class
divide,HTCexp,HTCexp-method	HTCexp-class
divide-methods	HTCexp-class
E14	Nora_5C
export	HTCexp-class
export,HTCexp,character,ANY-method	HTCexp-class
export-methods	HTCexp-class
export.my5C	export.my5C
exportC	exportC
extractRegion	extractRegion
gdiag	HiTC-internal
getDeltaRange	HiTC-internal
getExpectedCounts	getExpectedCounts
heatmapC	HiTC-internal
HTCexp	HTCexp-class
HTCexp-class	HTCexp-class
id	HTCexp-class
id,Genome_intervals-method	HTCexp-class
id-methods	HTCexp-class
id<-	HTCexp-class
id<-,Genome_intervals,factor-method	HTCexp-class
id<--methods	HTCexp-class
import.my5C	import.my5C
importC	importC
intdata	HTCexp-class
intdata,HTCexp-method	HTCexp-class
intdata-methods	HTCexp-class
intdata<-	HTCexp-class
intdata<-,HTCexp,matrix-method	HTCexp-class
intdata<--methods	HTCexp-class
intervalsDist	intervalsDist
isBinned	HTCexp-class
isBinned,HTCexp-method	HTCexp-class
isBinned-methods	HTCexp-class
isIntraChrom	HTCexp-class
isIntraChrom,HTCexp-method	HTCexp-class
isIntraChrom-methods	HTCexp-class
mapC	mapC
MEF	Nora_5C
my5C2gr	HiTC-internal
myPalette	HiTC-internal
Nora_5C	Nora_5C
normPerExpected	HTCexp-class
normPerExpected,HTCexp-method	HTCexp-class
normPerExpected-methods	HTCexp-class
normPerReads	HTCexp-class
normPerReads,HTCexp-method	HTCexp-class
normPerReads-methods	HTCexp-class
normPerTrans	HTCexp-class
normPerTrans,HTCexp-method	HTCexp-class
normPerTrans-methods	HTCexp-class
normPerZscore	HTCexp-class
normPerZscore,HTCexp-method	HTCexp-class
normPerZscore-methods	HTCexp-class
pair.chrom	HiTC-internal
plot	HTCexp-class
plot,HTCexp,ANY-method	HTCexp-class
plot,HTCexp,HTCexp-method	HTCexp-class
plot-methods	HTCexp-class
range	HTCexp-class
range,HTCexp-method	HTCexp-class
range-methods	HTCexp-class
readBED	readBED
removeIntervals	removeIntervals
seq_name	HTCexp-class
seq_name,HTCexp-method	HTCexp-class
seq_name-methods	HTCexp-class
setIntervalScale	setIntervalScale
show	HTCexp-class
show,HTCexp-method	HTCexp-class
show-methods	HTCexp-class
substract	HTCexp-class
substract,HTCexp,HTCexp-method	HTCexp-class
substract-methods	HTCexp-class
tricube	HiTC-internal
triViewC	HiTC-internal
x_intervals	HTCexp-class
x_intervals,HTCexp-method	HTCexp-class
x_intervals-methods	HTCexp-class
x_intervals<-	HTCexp-class
x_intervals<-,HTCexp,Genome_intervals-method	HTCexp-class
x_intervals<--methods	HTCexp-class
y_intervals	HTCexp-class
y_intervals,HTCexp-method	HTCexp-class
y_intervals-methods	HTCexp-class
y_intervals<-	HTCexp-class
y_intervals<-,HTCexp,Genome_intervals-method	HTCexp-class
y_intervals<--methods	HTCexp-class
