d1c40b0237a9f8fed0a80469e2e4f752 *DESCRIPTION
c11761f2a0837755ab41d471a783ef32 *INDEX
51ec0d5faaea72a2b2014aed7de39323 *Meta/Rd.rds
cbc7099947c7ebf8fcc8d1c530fe1907 *Meta/data.rds
4ec19b4d339747b45bc8aa82ff4c90a9 *Meta/hsearch.rds
0dc979083b96c8948d8301f4b7b51da7 *Meta/links.rds
43e1e350a89dc12d6b3a11da6ed6e781 *Meta/nsInfo.rds
b2b7773e9bd89867b175ab179ade947a *Meta/package.rds
7ec738565f763d5e59da9b013876b733 *Meta/vignette.rds
1d2508a36e21ea09ee4475a055a4edc5 *NAMESPACE
3a5fbb3686117c9533c9649b898fb26c *NEWS
240d28d145138a75831809e31a480bad *R/Biostrings
e5ff287c88806ec1c9961b6278e08c8f *R/Biostrings.rdb
d69b6973d85859d7f5b88eb477fe4477 *R/Biostrings.rdx
58ba518a6603eb09980fc86b83f0470b *UnitTests/runit-MultipleAlignment.R
a277f98071d16c171d1a909f36636b2a *UnitTests/runit-XString.R
859698f78570546de545ff45c02d1df0 *UnitTests/runit-XStringSet.R
9bf0e5b015c419301777a6730d585f83 *UnitTests/runit-XStringSetList.R
5a4fe6582d86f20f68c627d1efd511c0 *UnitTests/runit-matchDNAPattern.R.FIXME
0371bd65424b6b0160dd18f537333cc0 *UnitTests/runit-matchPDict.R
2f8ad90cc9b14f279a9b6507211cd09c *UnitTests/runit-pairwiseAlignment.R
fb21544885b0d8e223dc707a19f703a6 *data/BLOSUM100.rda
370ae409745a34652b50f6c0992a7c36 *data/BLOSUM45.rda
ff21fdf7ae6c26d41265485e06678c47 *data/BLOSUM50.rda
938f1640bbcee65ce83726127c8efa8f *data/BLOSUM62.rda
ec70a69370ee7b924a1521bd22a0b92a *data/BLOSUM80.rda
4bb649b15a1c70fdc6beb4ea37ca8d58 *data/HNF4alpha.rda
b85025df056de88ad4e0ec260b4fbd3e *data/PAM120.rda
d790bbcef52f77bdbac03ca4fe317a0d *data/PAM250.rda
5ab6a6fb04f2bb2011c96abdea970b87 *data/PAM30.rda
d234baa0914f6233478aa0687fdbe10c *data/PAM40.rda
8533b9535b841e231b9babd78d584885 *data/PAM70.rda
d1f902614de1a9eba90d8387690c2688 *data/phiX174Phage.rda
ea5bd4d16695006aab9061c351649bb6 *data/srPhiX174.rda
e566417a897993c19e4b81e517778b6c *data/yeastSEQCHR1.rda
e919d958d2d4591086ade82640727b72 *doc/Biostrings2Classes.R
d7f69eedb9db937ef0b727cd1d558b8d *doc/Biostrings2Classes.Rnw
947950adf57513a3f641d14dc8c9c489 *doc/Biostrings2Classes.pdf
ebaaf15e9ad9332cc13c3b3a26b47c8a *doc/MultipleAlignments.R
61f53dbee2860c3e5cd6924d8e158129 *doc/MultipleAlignments.Rnw
eebd5218d6e876624cc8d32cf5773fa2 *doc/MultipleAlignments.pdf
2217c12d2babced22046ced6fa07995b *doc/PairwiseAlignments.R
8588847ffbf2f5bddeaf6c21ac130e11 *doc/PairwiseAlignments.Rnw
c11b1d5772886f723a213a5c5a3558ab *doc/PairwiseAlignments.pdf
8c3b104c1929264c51f60654402a3fb9 *doc/SolexaYi2-benchmark.txt
425ff8bacab8b5a09c3bc55983d6703e *doc/index.html
efeda5f049fd8b3069deff64476c3f92 *doc/matchprobes.R
20240e9aa6dbe5f3096bbc9312c7af98 *doc/matchprobes.Rnw
f7692c64fc109444fc634a8dfbfb7569 *doc/matchprobes.pdf
78e8db3ebcbc095287e6fd8ccfe0e1a2 *extdata/Phylip.txt
7f161a63a48b12b70bb9a0e56d04245d *extdata/README
24604bc9ec4790d5d590a623edea5548 *extdata/Sc.fa
1a6fe1b8caec191eb16265cc5b1d7563 *extdata/Sp.fa
cfea9d61b851d60768c0751e17ab9937 *extdata/fastaEx.fa
c4114941da5b3499beff7b3f87c84166 *extdata/hg18chr8_gap.txt
76897b4820e1ed23b787a171ae4d3b5a *extdata/hg18chrY_gap.txt
3f5e79e34a204b72bb52b2e5d2b79f19 *extdata/msx2_mRNA.aln
23770dfd9eb85ab715b4cc28268bbc42 *extdata/s_1_sequence.txt
6210f3d073b676bc7bed60172a72c3e3 *extdata/someORF.fa
441d9e3d9df65c4c97882eed38baa24f *help/AnIndex
ecd7fbdb27dba54e87ac69022494750c *help/Biostrings.rdb
dcca1d073ebcbc948dd9d79fa220a895 *help/Biostrings.rdx
15c75fcd8d1ec42d963f2312bb2323c9 *help/aliases.rds
fa117f699fb99b8efeb2fa8285e24efe *help/paths.rds
355bf9408957b14312bf2124be3ef08c *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
3879a49ab5f67019b6da6ea0c818968a *include/Biostrings_defines.h
c8826128d90e6d498b6b67d7695d5fc1 *include/Biostrings_interface.h
e008c04c4610f163a0b45d732374d9c0 *include/_Biostrings_stubs.c
55f7fc02ae1aeb6ac47f4a777fd510b3 *libs/i386/Biostrings.dll
6611df66a232289f61912dbf151b8e90 *libs/x64/Biostrings.dll
