6c726203e722bd91220e6dbb1cca11c5 *DESCRIPTION
5045805be2b20988c1fedfeb68e6ce14 *INDEX
717298e574aade3deb7313802e624033 *Meta/Rd.rds
6861193226197d68567cb52a71d197ec *Meta/data.rds
65d40069f163b0ee5405f9c9fa3e6383 *Meta/hsearch.rds
5b96a102aaa38cc18251dde75b833285 *Meta/links.rds
fcb027ed4a76491ec35d9920b4881467 *Meta/nsInfo.rds
77fed56e3975b564b1c1ebbb0a65c22e *Meta/package.rds
6541fc6abd91689d25c216f8e505bc8e *NAMESPACE
240d28d145138a75831809e31a480bad *R/davidTiling
13c46660c93387827434e0fb412e09ff *R/davidTiling.rdb
bcb7c2e2596c16544fc42586c9fedc52 *R/davidTiling.rdx
a98ab1989579e9cb294d012dac265467 *celfiles/030505_totcDNA_15ug_affy.cel.gz
b7bc093d0933541090fd27a46d9e5b8e *celfiles/041119_S96genDNA_re-hybe.cel.gz
3d9973b0b795fecfdd87fc7a832b6a06 *celfiles/041120_S96genDNA_re-hybe.cel.gz
355430525397d728b0f99c88362d9951 *celfiles/050409_totcDNA_14ug_no52.cel.gz
2d70085c2bea39409787baad9e5b313b *celfiles/05_04_20_2xpolyA_NAP_2to1.cel.gz
5467d5e6a55436f14fb112ed67551554 *celfiles/05_04_26_2xpolyA_NAP2.cel.gz
989015dafb6f00f5b1106ceb6b92d42c *celfiles/05_04_27_2xpolyA_NAP3.cel.gz
d5e517474e5da3f33071862e59054d78 *celfiles/09_11_04_S96_genDNA_16hrs_45C_noDMSO.cel.gz
2cbf6b1c7ddcfe21f527aea9f5debce3 *data/datalist
68dd453c462dcb00c6b5dd96138f4d5f *data/davidTiling.rda
639fdaa2863f7e8b8a8a0766dc1892ea *data/gff.rda
73dd16bb196bd26a804ea19ae38ceee5 *data/probeAnno.rda
8a976a55f83d98c0c9a9105aabd713cd *data/yeastFeatures.R
5df8223f632d06d16a3bfb1021cfeab8 *doc/Archi_RT_positions.txt
9ea86911ed00f29347cabb681a62b1fd *doc/index.html
51b8bdfc022b20f4c3c1c2fca36ce020 *doc/strongConservedNovelIsolated.txt
e53acc66c2a5cd0cd916cefeeb0c374a *doc/utrmap-GOcategories.txt
d06f3b7dc24179384ba378d1bf0b31f0 *help/AnIndex
b7221c8dfbde441856e2ac438e314926 *help/aliases.rds
69c74c206dc92de238f8a99c9cf95ba7 *help/davidTiling.rdb
4b51ab379e15f9864b70047574e3dd93 *help/davidTiling.rdx
5fe2b894f8e95df640300fdc5df53eee *help/paths.rds
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444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
3cbf724cbfc86159257792f8571f7ebf *scripts/analyzeNovelFiltered.R
1f387703b35f17ed5dee88f06faec9ec *scripts/antisense-GO.R
9ed94ca3b515994472f8ab58bc2b6d66 *scripts/antisense-UTR.R
a73860114c19110ecf61e06252f40a77 *scripts/antisense-export.R
978de8b907a360d2ac608b938d476dac *scripts/assessNorm.R
8192a11182edf259444f3d046ccb8d29 *scripts/blast_Spombe.R
5ed46c7c71902ba931cb659f72a4f96d *scripts/blast_threefunghi.R
370b02323cc43cd7ec30699130d58769 *scripts/calcThreshold.R
0daefbb3f27c0473d75c571c3495b0f5 *scripts/categorizeSegments.R
a6744b4bfecd9a48d309d435f2ad604d *scripts/divergentTranscription.R
30787918590c1479a571798fc5960d21 *scripts/doQualityReport.R
00b99e970c0b8e77952bc63c816cb4e4 *scripts/exportSegScore.R
3ee95e3abce230ddb620441321b2dc3c *scripts/expressedFeatures.R
c9941b48afd3f6215ebf5752c2f10fc9 *scripts/fig1.R
d99ab717aa809364ef668174fd57f153 *scripts/fig_modelselect.R
1170cc3affabdeee88ff841b3b61730a *scripts/fig_norm.R
4f05c52fd53db485e1010a06200950db *scripts/findORF.R
fec16080645ba51280217e44231c4bff *scripts/lowTranscribedRegions.R
f1b8bfeb1496da77ddb442efc1d29f65 *scripts/make.R
6f93a92fd2fa3e0a8fe3e5b115f9a095 *scripts/makeProbeAnno.R
986fa3b166670243054029fe98c4a095 *scripts/makecs.R
11131c76ed7b317a3ef50e3db36da394 *scripts/mapProbesToGenome.sh
3e0b4c4e986f2854f8112477a30f916d *scripts/normalize.R
e235419c82f82b9a57a787e7fee7626b *scripts/operons.R
18f011eefd851931b7a1c45514f47e9b *scripts/phastCons.R
6b60f8d8dcd5088fa8d2c39f5d6411b8 *scripts/plotrtpcr.R
e355311e5c000ae3f9a7d4cb646ef416 *scripts/readSegments.R
d7bd704c1c8feb73b417e835b9b1f58f *scripts/sageVelculescu.R
e8278270cc6044b6c183211d94f314cc *scripts/scoreSegments.R
cb788a5fba0e683e63a2a5cc52851e93 *scripts/segConservation.R
a7256a087ee14cba7f5eb3c947dc15d2 *scripts/segSequencesWrite.R
711153b145b611e45090a0849a3010b1 *scripts/segment.R
3daa6e83e66ff1008400f6fa9bd26162 *scripts/table-ncRNAs.R
dfb70bd476130deea81382ced697f5a5 *scripts/tableSegments.R
e61f3087b530bac354451c4baf7e38bb *scripts/transcriptionThruPromoters.R
22471b17d99b0e17c72c2bf20ff58867 *scripts/transferPostProbs2R.R
8409571e79c27a51dc4e9672870bee76 *scripts/uniqueInGenome.R
9850f2ff9b6239bcb5c7f1f06e068665 *scripts/utrmap.R
be452938ed19aaf595270e6a2cea4bac *scripts/viewAllSegs.R
4e1a76aba7800ac3f140923f855df837 *scripts/viewSegmentation.R
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e06759ba08c422aa72f4107f237ab758 *scripts/workflowOverview.Rnw
67334bc7bd958a14381e528ae437c651 *scripts/writeProbeSeqsFasta.R
2640c7b56004b9f5a7ecb66083207845 *scripts/writeSegmentTable.R
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b353a997152db774bcdf791e3d16193b *website/segmentTableDescription.html
8e42f262961d20926d13b1863c178406 *website/viewYeastTilingArray.pl
