Package: cummeRbund
Title: Analysis, exploration, manipulation, and visualization of
        Cufflinks high-throughput sequencing data.
Version: 1.2.0
Date: 2011-08-18
Author: L. Goff, C. Trapnell
Description: Allows for persistent storage, access, exploration, and manipulation of Cufflinks high-throughput sequencing data.  In addition, provides numerous plotting functions for commonly used visualizations.
Suggests: cluster
Imports: methods
Depends: R (>= 2.7.0), RSQLite, ggplot2, reshape2
Maintainer: Loyal A. Goff <lgoff@csail.mit.edu>
License: Artistic-2.0
Collate: AllGenerics.R AllClasses.R database-setup.R methods-CuffSet.R
        methods-CuffData.R methods-CuffDist.R methods-CuffGeneSet.R
        methods-CuffFeatureSet.R methods-CuffGene.R
        methods-CuffFeature.R tools.R
LazyLoad: yes
biocViews: HighThroughputSequencing, HighThroughputSequencingData,
        RNAseq, RNAseqData, GeneExpression, DifferentialExpression,
        Infrastructure, DataImport, DataRepresentation, Visualization,
        Bioinformatics, Clustering, MultipleComparisons, QualityControl
Packaged: 2012-03-31 09:07:29 UTC; biocbuild
Built: R 2.15.0; ; 2012-03-31 12:31:08 UTC; windows
