$,BeadStudioSetList-method	BeadStudioSetList-class
$<-,BeadStudioSetList-method	BeadStudioSetList-class
BeadStudioSet	BeadStudioSet
BeadStudioSetList	BeadStudioSetList
BeadStudioSetList-class	BeadStudioSetList-class
centerAutosomesAt	centerAutosomesAt
copyNumberLimits	copyNumberLimits
emission	Viterbi-methods
emission,Vit-method	Viterbi-methods
hmm	hmm-methods
hmm,BeadStudioSet-method	hmm-methods
hmm,BeadStudioSetList-method	BeadStudioSetList-class
hmm,CNSet-method	hmm-methods
hmm,oligoSnpSet-method	hmm-methods
hmm,SnpSet-method	hmm-methods
hmm-methods	hmm-methods
hmm.setup	defunct
hmmBeadStudioSet	hmmBeadStudioSet
hmmOligoSnpSet	hmmBeadStudioSet
HmmOptionList	defunct
HmmOptionList-class	defunct
hmmResults	hmmResults
hmmSnpSet	hmmSnpSet
icePlatforms	icePlatforms
length,BeadStudioSetList-method	BeadStudioSetList-class
read.bsfiles	read.bsfiles
rescale	rescale
robustSds	robustSds
rowMAD	rowMAD
sd	sd-methods
sd,CopyNumberSet-method	sd-methods
sd,oligoSnpSet-method	sd-methods
sd-methods	sd-methods
Viterbi-methods	Viterbi-methods
viterbi2Wrapper	viterbi2Wrapper
[,BeadStudioSetList-method	BeadStudioSetList-class
[[,BeadStudioSetList-method	BeadStudioSetList-class
