Package: GOSemSim
Type: Package
Title: GO-terms Semantic Similarity Measures
Version: 1.14.0
Author: Guangchuang Yu
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Description: Implemented five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively for estimating GO semantic similarities. Support many species, including Anopheles, Arabidopsis, Bovine, Canine, Chicken, Chimp, Coelicolor, E coli strain K12 and Sakai, Fly, Human, Malaria, Mouse, Pig, Rhesus, Rat, Worm, Xenopus, Yeast, and Zebrafish.
Depends: R (>= 2.10)
Imports: methods, AnnotationDbi, GO.db, org.Hs.eg.db
Suggests: DOSE, clusterProfiler
biocViews: GO, Clustering, Pathways, Bioinformatics
Collate: 'AllGenerics.R' 'ClassGeneClusterSet.R' 'ClassGeneSet.R'
        'ClassGOSet.R' 'ClassParams.R' 'combineMethods.R' 'ICMethods.R'
        'oldFunctionCall.R' 'WangMethod.R' 'utilities.R' 'zzz.R'
License: GPL-2
URL: http://bioinformatics.oxfordjournals.org/content/26/7/976.full
Packaged: 2012-03-31 08:34:56 UTC; biocbuild
Built: R 2.15.0; ; 2012-03-31 12:37:30 UTC; windows
