CellNOptR-package	CellNOptR-package
CellNOptR	CellNOptR-package
checkSignals	checkSignals
CNOlistDREAM	CNOlistDREAM
CNOlistToy	CNOlistToy
CNOlistToy2	CNOlistToy2
CNORwrap	CNORwrap
compressModel	compressModel
cutAndPlotResultsT1	cutAndPlotResultsT1
cutAndPlotResultsT2	cutAndPlotResultsT2
cutNONC	cutNONC
cutSimList	cutSimList
defaultParameters	defaultParameters
DreamModel	DreamModel
expandGates	expandGates
findNONC	findNONC
gaBinaryT1	gaBinaryT1
gaBinaryT2	gaBinaryT2
getFit	getFit
indexFinder	indexFinder
makeCNOlist	makeCNOlist
normaliseCNOlist	normaliseCNOlist
plotCNOlist	plotCNOlist
plotCNOlistLarge	plotCNOlistLarge
plotCNOlistLargePDF	plotCNOlistLargePDF
plotCNOlistPDF	plotCNOlistPDF
plotFit	plotFit
plotModel	plotModel
plotOptimResults	plotOptimResults
plotOptimResultsPDF	plotOptimResultsPDF
prep4Sim	prep4Sim
preprocessing	preprocessing
readMIDAS	readMIDAS
readSif	readSif
residualError	residualError
simulateT1	simulateT1
simulatorT1	simulatorT1
simulatorT2	simulatorT2
ToyModel	ToyModel
ToyModel2	ToyModel2
writeDot	writeDot
writeNetwork	writeNetwork
writeReport	writeReport
writeScaffold	writeScaffold
