CLLbatch                 package:CLL                 R Documentation

_T_h_e _A_f_f_y_B_a_t_c_h _o_b_j_e_c_t _f_o_r _t_h_e _C_L_L _m_i_c_r_o_a_r_r_a_y _d_a_t_a

_D_e_s_c_r_i_p_t_i_o_n:

     The AffyBatch object has 24 samples that were affixed to
     Affymetrix hgu95av2 arrays.  These 24 samples came from 24 CLL
     patients that were either classified as stable or progressive in
     regards to disease progression.

_U_s_a_g_e:

     data(CLLbatch)

_F_o_r_m_a_t:

     An AffyBatch object with 24 samples and 12,625 genes.  The
     Affymetrix hgu95av2 array was used.  

     '_c_d_f_N_a_m_e' the name of the CDF file: HG_U95Av2

     '_n_r_o_w' the number of rows for each chip: 640

     '_n_c_o_l' the number of columns for each chip: 640

     '_e_x_p_r_s' the matrix containing one probe per row and one array per
          column (dimensions: 409,600 by 24)

     '_s_e._e_x_p_r_s' the matrix for standard errors: not calculated yet so
          has dimensions 0 by 0

     '_d_e_s_c_r_i_p_t_i_o_n' no information is available for the description
          slot, which is of class MIAME

     '_a_n_n_o_t_a_t_i_o_n' "hgu95av2"

     '_n_o_t_e_s' there are no notes for this object

     '_r_e_p_o_r_t_e_r_I_n_f_o' unknown (NULL)

     '_p_h_e_n_o_D_a_t_a' a data frame with one variable: sample (more phenotype
          data can be found in the disease data frame) 

     '_c_l_a_s_s_V_e_r_s_i_o_n' no version

_S_o_u_r_c_e:

     The CLL microarray data came from  Dr. Sabina Chiaretti at
     Division of Hematology, Department of Cellular Biotechnologies and
     Hematology, University La Sapienza, Rome, Italy and Dr. Jerome
     Ritz at Department of Medicine, Brigham and Women's Hospital,
     Harvard Medical School, Boston, Massachusetts.

_E_x_a_m_p_l_e_s:

     data(CLLbatch)

