pfamTC2AC                package:PFAM                R Documentation

_M_a_p_p_i_n_g_s _f_r_o_m _T_r_u_s_t_e_d _c_u_t_o_f_f _t_o _A_c_c_e_s_s_i_o_n _n_u_m_b_e_r

_D_e_s_c_r_i_p_t_i_o_n:

     Mapping function from Trusted cutoff (TC) to the associated
     Accession number (AC)

_U_s_a_g_e:

     pfamTC2AC(tc=NULL)

_A_r_g_u_m_e_n_t_s:

      tc: A character vector of Trusted cutoff or NULL (default)

_D_e_t_a_i_l_s:

     If 'tc' is a vector of Trusted cutoff,  pfamTC2AC will return a
     list of associated Accession number for the given 'tc'.  If 'tc'
     is NULL,  pfamTC2AC(tc=NULL) (or pfamTC2AC()) will return a list
     of associated Accession number for all the Trusted cutoff in the
     database. Extra information:  None More Details: None

_V_a_l_u_e:

     A list of Accession number.

_A_u_t_h_o_r(_s):

     Ting-Yuan Liu

_R_e_f_e_r_e_n_c_e_s:

     <URL: http://www.sanger.ac.uk/Software/Pfam/> and <URL:
     ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt>

_E_x_a_m_p_l_e_s:

     ## Not run: 
         TC2AC <- pfamTC2AC()
         head(TC2AC)
         pfamTC2AC(tc=sample(names(TC2AC), 3))
     ## End(Not run)

