pfamAC2TC                package:PFAM                R Documentation

_M_a_p_p_i_n_g_s _f_r_o_m _A_c_c_e_s_s_i_o_n _n_u_m_b_e_r _t_o _T_r_u_s_t_e_d _c_u_t_o_f_f

_D_e_s_c_r_i_p_t_i_o_n:

     Mapping function from Accession number (AC) to the associated
     Trusted cutoff (TC)

_U_s_a_g_e:

     pfamAC2TC(ac=NULL)

_A_r_g_u_m_e_n_t_s:

      ac: A character vector of Accession number or NULL (default)

_D_e_t_a_i_l_s:

     If 'ac' is a vector of Accession number,  pfamAC2TC will return a
     list of associated Trusted cutoff for the given 'ac'.  If 'ac' is
     NULL,  pfamAC2TC(ac=NULL) (or pfamAC2TC()) will return a list of
     associated Trusted cutoff for all the Accession number in the
     database. Extra information:  None More Details: None

_V_a_l_u_e:

     A list of Trusted cutoff.

_A_u_t_h_o_r(_s):

     Ting-Yuan Liu

_R_e_f_e_r_e_n_c_e_s:

     <URL: http://www.sanger.ac.uk/Software/Pfam/> and <URL:
     ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt>

_E_x_a_m_p_l_e_s:

     ## Not run: 
         AC2TC <- pfamAC2TC()
         head(AC2TC)
         pfamAC2TC(ac=sample(names(AC2TC), 3))
     ## End(Not run)

