maDotsDefaults            package:marray            R Documentation

_R_e_p_l_a_c_e _g_r_a_p_h_i_c_a_l _d_e_f_a_u_l_t _p_a_r_a_m_e_t_e_r_s _b_y _u_s_e_r _s_u_p_p_l_i_e_d _p_a_r_a_m_e_t_e_r_s

_D_e_s_c_r_i_p_t_i_o_n:

     This function may be used to compare default graphical parameters
     for microarray diagnostic plots to user supplied parameters given
     in '...'. User supplied parameters overwrite the defaults. It is
     used in 'maBoxplot', 'maPlot', and 'maImage'.

_U_s_a_g_e:

     maDotsDefaults(dots, defaults)

_A_r_g_u_m_e_n_t_s:

    dots: List of user supplied parameters, e.g. from 'list(...)'.

defaults: List of default parameters, e.g. from the function
          'maDefaultPar'.

_V_a_l_u_e:

    args: List of graphical parameters.

_A_u_t_h_o_r(_s):

     Sandrine Dudoit, <URL: http://www.stat.berkeley.edu/~sandrine>.

_R_e_f_e_r_e_n_c_e_s:

     S. Dudoit and Y. H. Yang. (2002). Bioconductor R packages for
     exploratory analysis and normalization of cDNA microarray data. In
     G. Parmigiani, E. S. Garrett, R. A. Irizarry and S. L. Zeger,
     editors, _The Analysis of Gene Expression Data: Methods and
     Software_, Springer, New York.

_S_e_e _A_l_s_o:

     'maDefaultPar', 'maBoxplot', 'maPlot', 'maImage'.

_E_x_a_m_p_l_e_s:

     dots<-list(xlab="X1", ylab="Y1")
     defaults<-list(xlab="X1", ylab="Y2", col=2)
     pars<-maDotsDefaults(dots, defaults)

     do.call("plot",c(list(x=1:10), pars))

