Entry: KEGGserver
Aliases: KEGGserver KEGGaction KEGGxmlns
Keywords: misc
Description: Definitions of objects used by other functions to access KESS SOAP service
URL: ../../../library/KEGGSOAP/html/KEGGserver.html

Entry: bget
Aliases: bget
Keywords: datasets
Description: Client-side interface to obtain KEGG database entries by a list of entry identifiers
URL: ../../../library/KEGGSOAP/html/bget.html

Entry: get.genes.by.motifs
Aliases: get.genes.by.motifs
Keywords: datasets
Description: Client-side interface to obtain the name of genes that contain the motifs represented by a set of motif ids
URL: ../../../library/KEGGSOAP/html/get.genes.by.motifs.html

Entry: get.genes.by.organism
Aliases: get.genes.by.organism
Keywords: datasets
Description: Client-side interface to obtain the KEGG ids for all the genes of a given organism
URL: ../../../library/KEGGSOAP/html/get.genes.by.organism.html

Entry: get.genes.by.pathway
Aliases: get.genes.by.pathway get.enzymes.by.pathway get.compounds.by.pathway get.reactions.by.pathway
Keywords: datasets
Description: Client-side interface to obtain the KEGG ids for genes/enzymes/compounds/reactions that are involved in the interactions in a given pathway
URL: ../../../library/KEGGSOAP/html/get.genes.by.pathway.html

Entry: get.motifs.by.gene
Aliases: get.motifs.by.gene
Keywords: datasets
Description: Client-side interface to obtain the name of genes that are homologous to a given gene
URL: ../../../library/KEGGSOAP/html/get.motifs.by.gene.html

Entry: get.paralogs.by.gene
Aliases: get.paralogs.by.gene
Keywords: datasets
Description: Client-side interface to obtain data for paralogous genes
URL: ../../../library/KEGGSOAP/html/get.paralogs.by.gene.html

Entry: get.pathways.by.genes
Aliases: get.pathways.by.genes get.pathways.by.enzymes get.pathways.by.compounds get.pathways.by.reactions
Keywords: datasets
Description: Client-side interface to obtain the KEGG pathway ids
URL: ../../../library/KEGGSOAP/html/get.pathways.by.genes.html

Entry: getBestNeighbors
Aliases: getBestNeighbors get.best.best.neighbors.by.gene get.best.neighbors.by.gene
Keywords: datasets
Description: Client-side interface to obtain the name of genes that are homologous to a given gene
URL: ../../../library/KEGGSOAP/html/getBestNeighbors.html

Entry: list.organisms
Aliases: list.organisms list.databases list.pathways
Keywords: datasets
Description: Client-side interface to obtain the names of organisms supported by KEGG databases
URL: ../../../library/KEGGSOAP/html/list.organisms.html

Entry: mark.pathway.by.objects
Aliases: mark.pathway.by.objects color.pathway.by.objects
Keywords: datasets
Description: Client-side interface to obtain an url for a KEGG pathway diagram with a given set of genes marked
URL: ../../../library/KEGGSOAP/html/mark.pathway.by.objects.html

Entry: search.compounds.by.name
Aliases: search.compounds.by.name search.compounds.by.mass search.compounds.by.composition search.compounds.by.subcomp
Keywords: datasets
Description: Client-side interface to obtain a list of chemical compounds
URL: ../../../library/KEGGSOAP/html/search.compounds.by.name.html

Entry: search.glycans.by.name
Aliases: search.glycans.by.name search.glycans.by.mass search.glycans.by.composition search.glycans.by.kcam
Keywords: datasets
Description: Client-side interface to obtain a list of chemical glycans
URL: ../../../library/KEGGSOAP/html/search.glycans.by.name.html
