AASequence            package:pairseqsim            R Documentation

_A_A_S_e_q_u_e_n_c_e _c_o_n_s_t_r_u_c_t_o_r

_D_e_s_c_r_i_p_t_i_o_n:

     AASequence constructor

_U_s_a_g_e:

     AASequence(info, sequence)

_A_r_g_u_m_e_n_t_s:

    info: info character

sequence: Protein sequence character

_D_e_t_a_i_l_s:

_V_a_l_u_e:

     Returns object of class 'AAsequence'

_A_u_t_h_o_r(_s):

     Witold E. Wolski witek96@users.sourceforge.net

_R_e_f_e_r_e_n_c_e_s:

     <URL: http://r4proteomics.sourceforge.net>

_S_e_e _A_l_s_o:

     'AASequence-class'

_E_x_a_m_p_l_e_s:

     ##---- Should be DIRECTLY executable !! ----
     ##-- ==>  Define data, use random,
     ##--    or do  help(data=index)  for the standard data sets.
     AASequence("my seq","MEDQVGFGFR")
     ## The function is currently defined as
     function(info,sequence)
       {
         if(!missing(info) && !missing(sequence))
           new("AASequence",sequence,info)
         else if(!missing(sequence))
           new("AASequence",sequence)
         else
           new("AASequnece")
       }

