Entry: mergeCoeff
Aliases: mergeCoeff-class mergeCoeff check.length coeff coeff<- stdcoeff stdcoeff<- zscore zscore<- coeff,mergeCoeff-method stdcoeff,mergeCoeff-method zscore,mergeCoeff-method coeff<-,mergeCoeff-method stdcoeff<-,mergeCoeff-method zscore<-,mergeCoeff-method mergeCoeff
Keywords: classes
Description: Class mergeCoeff, a class for storing regression coefficients.
URL: ../../../library/MergeMaid/html/class.mergeCoeff.html

Entry: mergeCor
Aliases: mergeCor-class mergeCor pairwise.cors integrative.cors pairwise.cors,mergeCor-method integrative.cors,mergeCor-method maxcors,mergeCor-method hist,mergeCor-method plot,list-method notes,mergeCor-method maxcors
Keywords: classes
Description: Class mergeCor, a class for storing data relevant to integrative correlation coefficients.
URL: ../../../library/MergeMaid/html/class.mergeCor.html

Entry: mergeExpressionSet
Aliases: mergeExpressionSet-class mergeExpressionSet geneStudy geneStudy<- subsetmES geneStudy,mergeExpressionSet-method exprs,mergeExpressionSet-method names,mergeExpressionSet-method notes,mergeExpressionSet-method phenoData,mergeExpressionSet-method length,mergeExpressionSet-method summary,mergeExpressionSet-method geneNames,mergeExpressionSet-method exprs<-,mergeExpressionSet-method geneNames<-,mergeExpressionSet-method names<-,mergeExpressionSet-method notes<-,mergeExpressionSet-method phenoData<-,mergeExpressionSet-method geneStudy<-,mergeExpressionSet-method [,mergeExpressionSet-method plot,mergeExpressionSet-method intcorDens,mergeExpressionSet-method intCor,mergeExpressionSet-method intersection,mergeExpressionSet-method modelOutcome,mergeExpressionSet-method isna maxintcor
Keywords: classes
Description: Class mergeExpressionSet, a class for merged microarray data, and methods for processing them
URL: ../../../library/MergeMaid/html/class.mergeExpressionSet.html

Entry: intCor
Aliases: intCor
Keywords: univar
Description: Correlation of Correlations
URL: ../../../library/MergeMaid/html/intCor.html

Entry: intcorDens
Aliases: intcorDens
Keywords: hplot
Description: plot of density functions of integrative correlations
URL: ../../../library/MergeMaid/html/intcorDens.html

Entry: intersection
Aliases: intersection
Keywords: manip
Description: ExpressionSet with all common genes in a mergeExpressionSet
URL: ../../../library/MergeMaid/html/intersection.html

Entry: mergeData
Aliases: mergeData sample1 sample2 sample3
Keywords: methods
Description: MergeMaid instance data for merging
URL: ../../../library/MergeMaid/html/mergeData.html

Entry: mergeExprs
Aliases: mergeExprs AverageDuplicates check mergeget
Keywords: manip
Description: Merge gene expression data sets
URL: ../../../library/MergeMaid/html/mergeExprs.html

Entry: modelOutcome
Aliases: modelOutcome
Keywords: models
Description: Compare regression coefficients across studies
URL: ../../../library/MergeMaid/html/modelOutcome.html
