plotrt-methods {xcms} | R Documentation

## Plot retention time deviation profiles

### Description

Use corrected retention times for each sample to calculate retention time deviation profiles and plot each on the same graph.

### Arguments

`object` | the `xcmsSet` object
`col` | vector of colors for plotting each sample
`ty` | vector of line and point types for plotting each sample
`leg` | logical plot legend with sample labels
`densplit` | logical, also plot peak overall peak density

### Methods

object = "xcmsSet"

  `plotrt(object, col = NULL, ty = NULL, leg = TRUE, densplit = FALSE)`

### See Also

`xcmsSet-class`, `retcor`

[Package xcms version 3.2.0 Index]