6a32d4cf9cd339382ec435705880db84 *DESCRIPTION
186d1f42bd997bac4e8450f9e13e26c8 *INDEX
7df27e8dcd4f32b146a7ac5ec0e3d1c5 *Meta/Rd.rds
fbad0e278d9a4f699bb7369a85ca2513 *Meta/data.rds
67d0d5964f3a04d88f780b55cff145de *Meta/features.rds
85a0fba4286f3680371cd52c41b5283a *Meta/hsearch.rds
baa03a748e7eebc02aa72b8d00ed2e2b *Meta/links.rds
452e32bb8552a0e2f99bada4b8821ae9 *Meta/nsInfo.rds
3c558946fae3cfdf38c75f9de4885efd *Meta/package.rds
9018fbca69aada99c21c7523a24e50f6 *Meta/vignette.rds
6e08034f74f8210c129eeecbc14b72cf *NAMESPACE
d41d8cd98f00b204e9800998ecf8427e *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/transcriptR
5bd157de85ced575039899bb667e4871 *R/transcriptR.rdb
906849a51c5bcd819aebfe008977b048 *R/transcriptR.rdx
cdccf718c0f06aa2b18213b6d1899638 *data/annot.rda
3292676f3b034c821e78e5ba5ed955f1 *data/cds.rda
1b1ba5e803d213909fdfda9ee7ef6fd4 *data/datalist
bde948fa74c19e5c334b355904c7b1f9 *data/tds.rda
29123ca7b1c27c22c15d4f8873a87a6d *doc/index.html
37d4a6b3676405234734cc21ce407d62 *doc/transcriptR.R
1c7517c75a85d9ecffd6011244ce35bf *doc/transcriptR.Rmd
c08d343cb5c46f02225fd81931dcee57 *doc/transcriptR.pdf
d50801198a9fc94ca2d340ba90cf9e15 *extdata/chip_reads.bam
b1bd75dd1f9641b9e89f1381a486d259 *extdata/chip_reads.bam.bai
7f2999eb7940a0c31d83d3a39444a75b *extdata/peaks.txt
b3efed05f16945956ab43ba1657823da *extdata/rna_reads.bam
1b5a7ab4d4b50c588dc2b61806e1537f *extdata/rna_reads.bam.bai
f47c69f99c9535dde5180b75f6485c58 *help/AnIndex
cab5fedd05fe2ec90f031f7bc22f721d *help/aliases.rds
c17874a7c0a1067bae73554bc3d1b2af *help/paths.rds
59fd6d9fa38a0f72fc496974bc1ae48e *help/transcriptR.rdb
6b34de0ff44858e1952dfdbe9372d1cd *help/transcriptR.rdx
c4eabd589355f5f7d82f0c61d4596d3a *html/00Index.html
11a12313da7f6b975f01167c5d55ba8c *html/ChipDataSet-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a655ee89425263459d73de535d88ca51 *html/TranscriptionDataSet-class.html
897abade1326d1e1b1806d5f1bc2dea5 *html/addFeature-methods.html
7930ca301290abd615f60f475cd3d8de *html/annot.html
66842b19f6591c29339c2327701ccd8f *html/annotateTranscripts-methods.html
7e3a6e2d16b293455caa6e8652918a8a *html/breakTranscriptsByPeaks-methods.html
670072168b5f6d79941bdff84d74fdc8 *html/cds.html
54c605bb034ef9ac1ebe084af8e08e8d *html/constructCDS.html
02bd6c97b2ee354c0cf330dac1354eaa *html/constructTDS.html
63686df4374c177b34a11db3215ab6bd *html/detectTranscripts-methods.html
ce51e4e211c4849b9d21918148456635 *html/estimateBackground-methods.html
610b534ed2f96c1b02bc0d2d3b6d5d87 *html/estimateGapDistance-methods.html
9419b5cb2d6b8048d772950119b6ccbe *html/exportCoverage-methods.html
8b0058d458763aae8ebb632ea2c5c9cc *html/getConfusionMatrix-methods.html
70f46ed811816695c53dfcd21a0bce81 *html/getGenomicAnnot-methods.html
be30c01f29a3085373dd126b4c5f06f3 *html/getPeaks-methods.html
53c8583f01a4a967816273d147cd9f81 *html/getPredictorSignificance-methods.html
48e5976b84b08406b002f5a13d761462 *html/getProbTreshold-methods.html
6460a45a41df0dc6d5307f8a87160301 *html/getQuadProb-methods.html
5a5e42f6b178bf2cb69ec081f8806111 *html/getTestedGapDistances-methods.html
5c005729ec4495d0c0a44494f1a511f7 *html/getTranscripts-methods.html
9549a09d2e26598899fc48e01f0eed45 *html/peaksToBed-methods.html
081f195fc0c7e3baf0be5ce6142d63ad *html/plotErrorRate-methods.html
06351da4bfccfa7354ddab0fac427a98 *html/plotFeatures-methods.html
3a9b456a35fd603d9e878337c47e3f04 *html/plotGenomicAnnot-methods.html
4a0f77c571acce40786e0a69d60179ad *html/plotROC-methods.html
f9d9a316c1cfcb46e5ba78fb62dca8dd *html/predictStrand-methods.html
e2451954543ab44babe92669a6de757c *html/predictTssOverlap-methods.html
90155fc8503295aae738a0d6746b632a *html/show.html
9ce40370a4e2afaa3867661a0f7682af *html/tds.html
fa2a92df46bfdba08fcc6ad2ba1f84ae *html/transcriptsToBed-methods.html
