SimilarityPlot {tRanslatome} | R Documentation

## SimilarityPlotHelpfile

### Description

This function displays in a barplot, for each GO ontology, the average semantic similarity value between GO terms showing enrichment at the first or at the second level of analysis.

### Usage

    SimilarityPlot(object, outputformat="on screen")

### Arguments

`object` | an object of class `GOsims`
`outputformat` | a character string specifying if the plot is saved in jpeg (`jpeg`), postscript (`postscript`), pdf (`pdf`) format, or it is simply displayed on the screen(`on screen`). By default this value is `on screen`.

### Author(s)

Toma Tebaldi, Erik Dassi, Galena Kostoska

### See Also

`GOComparison` `GOsets` `GOsims`

### Examples

    data(tRanslatomeSampleData)
    SimilarityPlot(CCComparison, outputformat="on screen")

[Package tRanslatome version 1.18.5 Index]