setEmissionThreshold {srnadiff} | R Documentation

## Set emission threshold (for the HMM step): the emission distribution being binomial, all the p-values less than this threshold belong to one class, and all the p-values greater than this threshold belong to the other class.

### Description

Set emission threshold (for the HMM step): the emission distribution being binomial, all the p-values less than this threshold belong to one class, and all the p-values greater than this threshold belong to the other class.

### Usage

    setEmissionThreshold(object, threshold)

    ## S4 method for signature 'sRNADiff,numeric'
    setEmissionThreshold(object, threshold)

### Arguments

`object` | An `srnadiff` object.
`threshold` | The emission threshold

### Value

The same object

### Examples

    exp <- sRNADiffExample()
    exp <- setEmissionThreshold(exp, 0.1)

[Package srnadiff version 1.0.0 Index]