readMiRBasePreAnnotation {srnadiff} | R Documentation

## Segmentation using an miRBase annotation file and use precursor miRNAs.

### Description

Segmentation using an miRBase annotation file and use precursor miRNAs.

### Usage

    readMiRBasePreAnnotation(fileName)

### Arguments

`fileName` | The annotation file name in GFF/GTF format.

### Value

A GRanges.

### Examples

    dir        <- system.file("extdata", package="srnadiff", mustWork = TRUE)
    gffFile    <- file.path(dir, "mirbase21_GRCh38.gff3")
    annotation <- readMiRBasePreAnnotation(gffFile)

[Package srnadiff version 1.0.0 Index]