seqbias.save {seqbias} | R Documentation

## Saving seqbias models

### Description

Writes to a seqbias model to a file suitable to loaded with 'seqbias.load'

### Usage

    seqbias.save(sb, fn)

### Arguments

`sb` | A seqbias class created with 'seqbias.fit' or 'seqbias.load'
`fn` | A file name to write the model to

### Details

A large seqbias model can take some time (several minutes) to fit. It is often preferable to do this just once. This function writes the model to a file in YAML format, suitable to be read with 'seqbias.load'.

### Author(s)

Daniel Jones dcjones@cs.washington.edu

### See Also

`seqbias.load`

### Examples

      reads_fn <- system.file( "extra/example.bam", package = "seqbias" )
      ref_fn <- system.file( "extra/example.fa", package = "seqbias" )

      sb <- seqbias.fit( ref_fn, reads_fn )

      seqbias.save( sb, "my_seqbias_model.yml" )

      # load sometime later
      sb <- seqbias.load( ref_fn, "my_seqbias_model.yml" )

[Package seqbias version 1.28.0 Index]