Package: scater
Type: Package
Authors@R: c(person("Davis", "McCarthy", role=c("aut", "cre"),
        email="davis@ebi.ac.uk"), person("Kieran", "Campbell", 
        role=c("aut"), email="kieran.campbell@sjc.ox.ac.uk"),  
        person("Aaron", "Lun", role = c("aut", "ctb"),
        email="aaron.lun@cruk.cam.ac.uk"), person("Quin", "Wills",
        role=c("aut"), email="qilin@quinwills.net"), 
        person("Vladimir", "Kiselev", role=c("ctb"),
        email="vk6@sanger.ac.uk"))
Maintainer: Davis McCarthy <davis@ebi.ac.uk>
Version: 1.8.4
Date: 2018-08-13
License: GPL (>= 2)
Title: Single-Cell Analysis Toolkit for Gene Expression Data in R
Description: A collection of tools for doing various analyses of
        single-cell RNA-seq gene expression data, with a focus on
        quality control.
Depends: R (>= 3.5), Biobase, ggplot2, SingleCellExperiment,
        SummarizedExperiment
Imports: BiocGenerics, data.table, dplyr, edgeR, ggbeeswarm, grid,
        limma, Matrix, DelayedMatrixStats, methods, parallel, plyr,
        reshape2, rhdf5, rjson, S4Vectors, shiny, shinydashboard,
        stats, tximport, utils, viridis, Rcpp (>= 0.12.14),
        DelayedArray
Suggests: BiocStyle, biomaRt, beachmat, cowplot, cluster, destiny,
        knitr, monocle, mvoutlier, rmarkdown, Rtsne, testthat,
        magrittr, pheatmap, DropletUtils, irlba
VignetteBuilder: knitr
LazyData: true
biocViews: SingleCell, RNASeq, QualityControl, Preprocessing,
        Normalization, Visualization, DimensionReduction,
        Transcriptomics, GeneExpression, Sequencing, Software,
        DataImport, DataRepresentation, Infrastructure, Coverage
LinkingTo: Rhdf5lib, Rcpp, beachmat
SystemRequirements: C++11
RoxygenNote: 6.0.1
NeedsCompilation: yes
URL: http://bioconductor.org/packages/scater/
BugReports: https://support.bioconductor.org/
git_url: https://git.bioconductor.org/packages/scater
git_branch: RELEASE_3_7
git_last_commit: d560a9a
git_last_commit_date: 2018-08-13
Date/Publication: 2018-08-13
Packaged: 2018-08-14 02:54:22 UTC; biocbuild
Author: Davis McCarthy [aut, cre],
  Kieran Campbell [aut],
  Aaron Lun [aut, ctb],
  Quin Wills [aut],
  Vladimir Kiselev [ctb]
Built: R 3.5.1; i386-w64-mingw32; 2018-08-14 10:37:06 UTC; windows
Archs: i386, x64
