Package: rcellminer
Type: Package
Title: rcellminer: Molecular Profiles and Drug Response for the NCI-60
        Cell Lines
Version: 2.2.0
Date: 2016-04-08
Author: Augustin Luna, Vinodh Rajapakse, Fabricio Sousa
Maintainer: Augustin Luna <lunaa@cbio.mskcc.org>, Vinodh Rajapakse
 <vinodh.rajapakse@nih.gov>, Fathi Elloumi <fathi.elloumi@nih.gov>
Description: The NCI-60 cancer cell line panel has been used over the course of
    several decades as an anti-cancer drug screen. This panel was developed as part
    of the Developmental Therapeutics Program (DTP, http://dtp.nci.nih.gov/) of the
    U.S. National Cancer Institute (NCI). Thousands of compounds have been tested
    on the NCI-60, which have been extensively characterized by many platforms for
    gene and protein expression, copy number, mutation, and others (Reinhold, et
    al., 2012). The purpose of the CellMiner project (http://discover.nci.nih.gov/
    cellminer) has been to integrate data from multiple platforms used to analyze
    the NCI-60 and to provide a powerful suite of tools for exploration of NCI-60
    data.
License: LGPL-3 + file LICENSE
LazyData: true
Imports: stringr, gplots, ggplot2, methods, stats, utils, shiny
Depends: R (>= 3.2), Biobase, rcdk, fingerprint, rcellminerData
Suggests: knitr, RColorBrewer, sqldf, BiocGenerics, testthat,
        BiocStyle, jsonlite, d3heatmap, glmnet, foreach, doSNOW,
        parallel
URL: http://discover.nci.nih.gov/cellminer/
VignetteBuilder: knitr
biocViews: aCGH, CellBasedAssays, CopyNumberVariation, GeneExpression,
        Pharmacogenomics, Pharmacogenetics, miRNA, Cheminformatics,
        Visualization, Software, SystemsBiology
RoxygenNote: 6.0.1
NeedsCompilation: no
Packaged: 2018-05-01 02:55:45 UTC; biocbuild
Built: R 3.5.0; ; 2018-05-01 12:37:11 UTC; windows
