readTFtargets {pwOmics} | R Documentation

## Read in matching transcription factor target gene pairs.

### Description

In case the user is able to provide a file with transcription factor - target gene matches (e.g. from TRANSFAC database) this function can read in the information. The file needs to be a txt file with first column transcription factors and second column target gene symbols without a header.

### Usage

    readTFtargets(data_omics, TF_target_path)

### Arguments

`data_omics` | OmicsData object.
`TF_target_path` | path of txt file containing the transcription factor target gene information as specified above.

### Value

data frame with user-specified TF target gene information.

[Package pwOmics version 1.12.0 Index]