identTFTGsinPWs {pwOmics} | R Documentation

## Prepare OmicsData object for pathway information.

### Description

This function identifies the TFs in the pathway genes and determines their target genes on basis of the given (chosen) TF-target database(s).

### Usage

    identTFTGsinPWs(data_omics, temp_genelist)

### Arguments

`data_omics` | OmicsData object.
`temp_genelist` | dataframe of unique gene IDs in PWs.

### Value

list with first element being a genelist of the pathways and second being a target gene list of TFs.

[Package pwOmics version 1.12.0 Index]